DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11456 and si:ch211-202h22.10

DIOPT Version :10

Sequence 1:NP_649265.1 Gene:CG11456 / 40309 FlyBaseID:FBgn0037031 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_017212100.3 Gene:si:ch211-202h22.10 / 100002322 ZFINID:ZDB-GENE-110914-121 Length:551 Species:Danio rerio


Alignment Length:408 Identity:104/408 - (25%)
Similarity:165/408 - (40%) Gaps:59/408 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YVCSLCLRQYDLQEDLRGHLVYFHGYEPISTPSV-KNKTAKTSTKEQTAAGSNSQDKQTVVERSE 72
            :.|:.|.::|.:::.|..|:....|.:|.:.|.. |..|||...|...:.  :.::|        
Zfish   154 FSCTQCGKRYKVKQSLESHMRVHTGEKPFACPQCGKGFTAKQCLKSHMSV--HIEEK-------- 208

  Fly    73 NSEPPASELQPMPFKDFRLVLRANML----EPCSFGKECPFKFQDATKMELHCSCHKGGS-FSCC 132
               |....|..|.| ..:..|:.:||    |.....::|...|.....:|.|...|.|.. |:|.
Zfish   209 ---PFNCSLCEMSF-THQQSLKRHMLIHVGEKPYVCRQCGKSFSVKQSLESHIRIHTGEKPFACA 269

  Fly   133 ECGMELPNWRRCSAHLWKAHQVDVDLLVCPVFECNYKSPISALVWRHMQVHKKWRP---RVLRSL 194
            |||......:...:|: :.| ..|....||  :|..:..:...:..||.:|...||   .:....
Zfish   270 ECGKGFAVKQNLESHM-RVH-TGVKPFSCP--QCGKRFTVKQSLESHMTIHTGERPFTCSMCDKT 330

  Fly   195 AAVQRRRK--LKEQSAEMAAQPAALPPSSKKNKY-------------YAEK--TCEICNRKFVNG 242
            ..|:.:.:  ::..:.|   :|...|...  |.|             ..||  :|..|.::|...
Zfish   331 FTVKHKLEYHMRNHTGE---KPYICPQCG--NSYALRNHLERHVRIHTGEKPFSCSKCAKRFTMK 390

  Fly   243 KTLSKHVKTVHNKIKPFICNVCGKKTARKASLIIHMRQHTGEKPLQCGECKFSTRDPSVLHKHRQ 307
            ::|..|:: |||:.||:||:.|||:...|.||..||..||||||..|.||..|......|..|.:
Zfish   391 QSLKSHMR-VHNRTKPYICSQCGKRFTVKQSLESHMSLHTGEKPFTCTECGKSYTLRQSLETHMR 454

  Fly   308 RHDSQDTRSSLKCSQCD-YFCIQANALKRHMRLNHAEAYRDLCCDICSFTSINVERLRAHKQDHR 371
            .|...   ....||.|. .|.::.| |..|||::..|  |...|..|........:|..|.:.|.
Zfish   455 VHTGD---KCFSCSDCGRSFTVKQN-LHVHMRVHTGE--RPYTCAQCGKRFTQHGQLNRHMRIHT 513

  Fly   372 QGLIT--NCEDSMDARAA 387
            :...|  ..|::::...|
Zfish   514 EQKTTRDRSEETLNDETA 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11456NP_649265.1 SUF4-like 232..>280 CDD:411020 20/47 (43%)
C2H2 Zn finger 232..253 CDD:411020 5/20 (25%)
C2H2 Zn finger 232..253 CDD:275368 5/20 (25%)
C2H2 Zn finger 261..281 CDD:275368 9/19 (47%)
C2H2 Zn finger 261..280 CDD:411020 9/18 (50%)
C2H2 Zn finger 289..309 CDD:275368 6/19 (32%)
si:ch211-202h22.10XP_017212100.3 C2H2 Zn finger 16..36 CDD:275368
C2H2 Zn finger 44..64 CDD:275368
COG5048 68..471 CDD:227381 88/343 (26%)
C2H2 Zn finger 72..92 CDD:275368
C2H2 Zn finger 100..120 CDD:275368
C2H2 Zn finger 128..148 CDD:275368
C2H2 Zn finger 156..176 CDD:275368 5/19 (26%)
C2H2 Zn finger 184..204 CDD:275368 6/21 (29%)
C2H2 Zn finger 212..232 CDD:275368 6/20 (30%)
C2H2 Zn finger 240..260 CDD:275368 4/19 (21%)
C2H2 Zn finger 268..288 CDD:275368 5/20 (25%)
C2H2 Zn finger 296..316 CDD:275368 5/21 (24%)
C2H2 Zn finger 324..344 CDD:275368 1/19 (5%)
C2H2 Zn finger 352..372 CDD:275368 3/21 (14%)
C2H2 Zn finger 380..400 CDD:275368 5/20 (25%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 464..484 CDD:275368 9/20 (45%)
zf-H2C2_2 480..501 CDD:463886 7/22 (32%)
C2H2 Zn finger 492..512 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.