DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN3 and Cops3

DIOPT Version :9

Sequence 1:NP_524190.2 Gene:CSN3 / 40308 FlyBaseID:FBgn0027055 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001004200.1 Gene:Cops3 / 287367 RGDID:1303002 Length:423 Species:Rattus norvegicus


Alignment Length:441 Identity:226/441 - (51%)
Similarity:303/441 - (68%) Gaps:19/441 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSALENYVNQVRTLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLLAK 65
            |.||||.:||.||.|||.|...:|.|.:.:|..|||:|.|.||.||..||:|:||||||.||..|
  Rat     1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVK 65

  Fly    66 LHSASTANPEPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILGIRIISRAI 130
            ....|.  |:...|...::.|:...|.|.:|||...|...||..|..:|::...:.||.|:.:||
  Rat    66 FSMPSV--PDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAI 128

  Fly   131 DQIRQLETQLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAECKTQQQQQSQHADANNDA 195
            |:::....|||.:|||||.|.|.||.|...|||||.|:.||      ||         .:...||
  Rat   129 DKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDI------CK---------ENGAYDA 178

  Fly   196 KYFLLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIAYIPK 260
            |:||.|:||||||||.:||:||||||:|..|||||||:||||||:|||:::||||:.||:..:||
  Rat   179 KHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPK 243

  Fly   261 NT-QVIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQVATSLYKRNIQ 324
            .| |::|||:||::|.||:|..||:.::..|||.::.|:||.|||||||||.||..:||||:|||
  Rat   244 YTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQ 308

  Fly   325 RLTKTFLTLSLSDVASRVQLASAVEAERYILNMIKSGEIYASINQKDGMVLFKDDPEKYNSPEMF 389
            |||||||||||.|:||||||:...|||:|:|:||:.|||:||||||||||.|.|:|||||:|.|.
  Rat   309 RLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAML 373

  Fly   390 LNVQNNITHVLDQVRQINKMEEEIILNPMYVKKALGSQDDDLTSQHPKTFS 440
            .|:...:...::...::..|::||.:||.:|:|::|||:|| :...|.::|
  Rat   374 HNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDD-SGNKPSSYS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN3NP_524190.2 PCI 275..378 CDD:279707 68/102 (67%)
Cops3NP_001004200.1 PCI 259..362 CDD:396121 68/102 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..423 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334437
Domainoid 1 1.000 243 1.000 Domainoid score I2148
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2710
Inparanoid 1 1.050 429 1.000 Inparanoid score I1673
OMA 1 1.010 - - QHG55351
OrthoDB 1 1.010 - - D453056at33208
OrthoFinder 1 1.000 - - FOG0005586
OrthoInspector 1 1.000 - - oto98506
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10758
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5221
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.010

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