DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN3 and csn3

DIOPT Version :9

Sequence 1:NP_524190.2 Gene:CSN3 / 40308 FlyBaseID:FBgn0027055 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_593155.3 Gene:csn3 / 2541912 PomBaseID:SPAC222.16c Length:338 Species:Schizosaccharomyces pombe


Alignment Length:347 Identity:70/347 - (20%)
Similarity:128/347 - (36%) Gaps:95/347 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 EPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSIL---------GIRIISRAI 130
            :|..|:....|||.:::.||           |:..:.:::....|:.         ...|:.:::
pombe    18 DPETLLLKFTDFVHQHSVEQ-----------CNQLSMYIIASVNSLAEAFYGSHPEKYNIVFQSV 71

  Fly   131 DQIRQLETQLTPIHADLCLL-----------SLKAKNFSVVLPYLDADITDISTVAAECKTQQQQ 184
            :.... ...::.:|  :|.|           |||:.|...|..::...|     :...|    ..
pombe    72 EYAAH-SPAISVMH--VCYLKELLRQGQYATSLKSFNDLEVSKHIPGSI-----LLQYC----MY 124

  Fly   185 QSQHADANNDAKYFLLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYKKFLMVSL 249
            .:.|...|||.                  :..:..||..:.|.|..:...|  .|||..||::.:
pombe   125 AAYHCLGNNDL------------------DSAKVWYFSILYIPTTTLTSFH--EEAYYSFLLLYI 169

  Fly   250 IVEGKIAYI----PKNTQVIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGL 310
            |..||...:    ..|...:.|.|.|    |.:.::.|....: .||.:|.::...|.:||:...
pombe   170 ITTGKKFQLDSATSSNVLPLKRHMVP----YEEFLDAYLKDVN-TLRTVIKEHWSRFLKDNSTAF 229

  Fly   311 AKQVATSLY-KRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILN--------MIKSGEIYAS 366
            . ..|..:| ...:::..|||.:|.|..:|.  |||.:.:..:.|:.        .:.:|||:.:
pombe   230 I-LFALEVYPMHRLKKWRKTFSSLKLEYIAK--QLAISQDVAKEIIQKFDNKTNFTVANGEIFLT 291

  Fly   367 INQKDGMVLFKDDPEKYNSPEM 388
            .|..|.:           ||||
pombe   292 FNALDDV-----------SPEM 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN3NP_524190.2 PCI 275..378 CDD:279707 25/111 (23%)
csn3NP_593155.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2582
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005586
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10758
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6002
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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