Protein Alignment CSN3 and rpn-3

DIOPT Version :9

• Sequence 1: NP_524190.2
• Gene: CSN3 / 40308
• FlyBaseID: FBgn0027055
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_498869.1
• Gene: rpn-3 / 176196
• WormBaseID: WBGene00004460
• Length: 504
• Species: Caenorhabditis elegans
• Alignment Length: 535
• Identity: 100/535 - (18%)
• Similarity: 177/535 - (33%)
• Gaps: 175/535 - (32%)

  Fly     4 ALENYVNQVRTLSASGSY--RELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYV--LLA 64
            |:||...|:..|.....:  ..:.:.||::..      .|.||||..|.....|....:.  :|.
 Worm    35 AVENIKEQLAALDKGEEHLITRVLQVLPKTRK------QINDNVLYKLVSSHLSSDAQFAEGMLK 93

  Fly    65 KLH---SAST-----------------------ANPEP---VQLIQLMRDFVQRNNNEQLR---- 96
            .||   :|.|                       |:||.   ::|:.|:..:.|:.|.|.|.
 Worm    94 YLHYTPAADTEVQPMDTSNVKTKSPKKGVKPVFASPESDCYLRLLVLLHLYAQKKNTEALALGEN 158

  Fly    97 ---------------------YAVCAFYETCHLFTEFVVQKNLSILGIRIISRAIDQIRQLETQL 140
                                 |.:|..||.                    ..|..|....|.::|
 Worm   159 QLTSIYNFDRRTLDGLAAKTLYFLCVIYER--------------------EGRLFDHQGFLNSRL 203

  Fly   141 TPIHADLCLLSLKAKNFS----VVLPYLDADITDISTVAAECK--TQQQQQSQHA---------D 190
            .         :...:|||    |::.:|           ..|.  .:|.|.:.|.         .
 Worm   204 R---------TATLRNFSESQAVLICWL-----------LRCYLINRQYQSAAHLVSKVAFPDNA 248

  Fly   191 ANNDAKYFLLYFYYGGMIYTAVKNYERAL-YFFEVCITTP---AMAMSHIMLEAYKKFLMVSLIV 251
            :|||   ...|.||.|.|.....:|..|. ||.:.....|   |:...    :|.:|:::|..::
 Worm   249 SNND---LARYMYYQGRIKALQLDYNSAAGYFLQAQRKAPQEGAIGFK----QAVQKWVVVIGLL 306

  Fly   252 EGKIAYIPKNTQVIGRFMKPMAN----HYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAK 312
            :|:   ||..:.    |.:|:..    ||.||.....:.........:.::...|..|:.:.|..
 Worm   307 QGE---IPDRSV----FRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFEADDTLTLIV 364

  Fly   313 QVATSLYKRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILNMIKSGEIYASINQ--KDG--M 373
            ::..::.|..|::::..:..:.:.|:|.::.:.:..|.|..:...|..|.|.|.|..  :||  .
 Worm   365 RLRQNVIKTAIKQISLAYSRIYIKDIAKKLYITNETETEYIVAKAIADGAIDAVITSDVRDGPRY 429

  Fly   374 VLFKDDPEKYNSPEMFLNVQNNITHVL-----------------------DQVRQINKMEEEIIL 415
            :...:..:.|.:.|...:....|.:.|                       :|.|:..:.|.|.
 Worm   430 MQSSETADIYRTSEPQAHFDTRIRYCLELHNQAVKALRYPPKKKIAVETIEQAREREQQELEF-- 492

  Fly   416 NPMYVKKALGSQDDD 430
                 .|.|..:|||
 Worm   493 -----AKELADEDDD 502

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN3	NP_524190.2	PCI	275..378	CDD:279707	20/106 (19%)
rpn-3	NP_498869.1	PCI	327..419	CDD:279707	17/91 (19%)
		Rpn3_C	437..494	CDD:285563	8/63 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160156124
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840