DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-R1 and AT2G20050

DIOPT Version :10

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_179595.5 Gene:AT2G20050 / 816524 AraportID:AT2G20050 Length:1094 Species:Arabidopsis thaliana


Alignment Length:437 Identity:118/437 - (27%)
Similarity:181/437 - (41%) Gaps:104/437 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LDAVHRMRHVRTSCTTIPEE------------DAVSDRSLQIHLSTLAREREQELELERQREREE 146
            :|.|.:.:..|.:|..|..|            |.::  .:.:|:..|                  
plant   356 VDMVAKHKDPRDACAAIVAESYRLWLQYETRTDDIT--IIVVHIDGL------------------ 400

  Fly   147 QVKLDASRQVISPDDCEDLSPMPQ------TAAPPV--------RRRGGISAEPV--TEEDATNY 195
              |.||.|| :|....:...|:||      :.:|..        |.|..:|...:  .|....|.
plant   401 --KDDAPRQ-LSSTGTQLQPPIPQVVELTGSESPSTFGWNSKNQRVRHDLSRARIRAIENSLENG 462

  Fly   196 VKKVVP-----KDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIAGENIIQQGDEGDN 255
            ...|.|     |.::....:.:.:..:.||..|.:|:...:.|.|..:....|:.:::||.|||.
plant   463 HAWVPPSPAHRKTWEEEAHIERVLRDHFLFRKLTDSQCQVLLDCMQRLEANPGDIVVKQGGEGDC 527

  Fly   256 FYVIDVGEVDVFV-----NSELVT-----TISEGGSFGELALIYGTPRAATVRAKTDVKLWGIDR 310
            |||:..||.:|..     |.|:..     |..:..|||||||::..|..|:|||.....||.:.|
plant   528 FYVVGSGEFEVLATQDGKNGEVPRILQRYTAEKQSSFGELALMHNKPLQASVRAVDHGTLWALKR 592

  Fly   311 DSYRRILMGSTIRKRKMYEEF--LSRVSILESLDKWERLT------VADSLETCSFDDGETIVKQ 367
            :.:|.|||          .||  |:.:.:|.|:|...|||      ||:||....|.||:|||.:
plant   593 EDFRGILM----------SEFSNLASLKLLRSVDLLSRLTILQLSHVAESLSEACFSDGQTIVTK 647

  Fly   368 GAAGDDFYIILEG------CAVVLQQRSEQG--------EDPAEVGRLGS-----SDYFGEIALL 413
            .......|:|.:|      |..||:.::...        .|..|:|...|     ..||||.|||
plant   648 DQKLQGLYVIQKGRVKISFCTEVLESQNVSSLTTGITNEYDNLEIGTEVSIEKHEGSYFGEWALL 712

  Fly   414 LDRPRAATVVARGPLKCVKLDRARFERVLGPCADILKRN-ITQYNSF 459
            .:...:.:|||.|.:.||.|.:..||..:||..:|.... .|:::||
plant   713 GELKDSLSVVAVGEVVCVVLTKENFESAVGPLTNISDDGPKTRHSSF 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 CAP_ED 219..328 CDD:237999 40/118 (34%)
CAP_ED 337..453 CDD:237999 45/141 (32%)
AT2G20050NP_179595.5 PP2Cc 123..397 CDD:238083 7/42 (17%)
CAP_ED 491..600 CDD:237999 38/108 (35%)
CAP_ED 617..>714 CDD:237999 30/96 (31%)
Protein Kinases, catalytic domain 797..1054 CDD:473864
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.