DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and AT2G20050

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_179595.5 Gene:AT2G20050 / 816524 AraportID:AT2G20050 Length:1094 Species:Arabidopsis thaliana


Alignment Length:437 Identity:118/437 - (27%)
Similarity:181/437 - (41%) Gaps:104/437 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LDAVHRMRHVRTSCTTIPEE------------DAVSDRSLQIHLSTLAREREQELELERQREREE 146
            :|.|.:.:..|.:|..|..|            |.::  .:.:|:..|                  
plant   356 VDMVAKHKDPRDACAAIVAESYRLWLQYETRTDDIT--IIVVHIDGL------------------ 400

  Fly   147 QVKLDASRQVISPDDCEDLSPMPQ------TAAPPV--------RRRGGISAEPV--TEEDATNY 195
              |.||.|| :|....:...|:||      :.:|..        |.|..:|...:  .|....|.
plant   401 --KDDAPRQ-LSSTGTQLQPPIPQVVELTGSESPSTFGWNSKNQRVRHDLSRARIRAIENSLENG 462

  Fly   196 VKKVVP-----KDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIAGENIIQQGDEGDN 255
            ...|.|     |.::....:.:.:..:.||..|.:|:...:.|.|..:....|:.:::||.|||.
plant   463 HAWVPPSPAHRKTWEEEAHIERVLRDHFLFRKLTDSQCQVLLDCMQRLEANPGDIVVKQGGEGDC 527

  Fly   256 FYVIDVGEVDVFV-----NSELVT-----TISEGGSFGELALIYGTPRAATVRAKTDVKLWGIDR 310
            |||:..||.:|..     |.|:..     |..:..|||||||::..|..|:|||.....||.:.|
plant   528 FYVVGSGEFEVLATQDGKNGEVPRILQRYTAEKQSSFGELALMHNKPLQASVRAVDHGTLWALKR 592

  Fly   311 DSYRRILMGSTIRKRKMYEEF--LSRVSILESLDKWERLT------VADSLETCSFDDGETIVKQ 367
            :.:|.|||          .||  |:.:.:|.|:|...|||      ||:||....|.||:|||.:
plant   593 EDFRGILM----------SEFSNLASLKLLRSVDLLSRLTILQLSHVAESLSEACFSDGQTIVTK 647

  Fly   368 GAAGDDFYIILEG------CAVVLQQRSEQG--------EDPAEVGRLGS-----SDYFGEIALL 413
            .......|:|.:|      |..||:.::...        .|..|:|...|     ..||||.|||
plant   648 DQKLQGLYVIQKGRVKISFCTEVLESQNVSSLTTGITNEYDNLEIGTEVSIEKHEGSYFGEWALL 712

  Fly   414 LDRPRAATVVARGPLKCVKLDRARFERVLGPCADILKRN-ITQYNSF 459
            .:...:.:|||.|.:.||.|.:..||..:||..:|.... .|:::||
plant   713 GELKDSLSVVAVGEVVCVVLTKENFESAVGPLTNISDDGPKTRHSSF 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 43/137 (31%)
CAP_ED 219..328 CDD:237999 40/118 (34%)
Crp 331..>442 CDD:223736 44/137 (32%)
CAP_ED 337..453 CDD:237999 45/141 (32%)
AT2G20050NP_179595.5 PP2Cc 123..397 CDD:238083 7/42 (17%)
CAP_ED 491..600 CDD:237999 38/108 (35%)
CAP_ED 617..>714 CDD:237999 30/96 (31%)
PKc_like 797..1054 CDD:419665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 66 1.000 Domainoid score I3580
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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