DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and prkar1a

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001025530.1 Gene:prkar1a / 594933 XenbaseID:XB-GENE-856481 Length:381 Species:Xenopus tropicalis


Alignment Length:383 Identity:254/383 - (66%)
Similarity:293/383 - (76%) Gaps:29/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 HEH---RLSLDAVHRMRHVRTSCTTIPEEDAVSDRSLQIHLSTLAREREQELELERQREREEQVK 149
            |:|   :|..|.:.::..||.:|.                 ....||..:.||.|..|:...|.|
 Frog    22 HKHNIQQLLKDCIVQLCTVRPACP-----------------MAFLREYFERLEKEEARQTLNQQK 69

  Fly   150 LDASRQVISPDDCED-LSPMP--QTAAPPVRRRGGISAEPVTEEDATNYVKKVVPKDYKTMNALS 211
             ..||.    |..|| :||.|  .:.....||||.||||..|||||.:||:||:|||||||.||:
 Frog    70 -SGSRS----DSREDEISPPPHMNSVVKGRRRRGAISAEVYTEEDAASYVRKVIPKDYKTMAALA 129

  Fly   212 KAIAKNVLFAHLDESERSDIFDAMFPVNHIAGENIIQQGDEGDNFYVIDVGEVDVFVNSELVTTI 276
            |||.|||||||||::||||||||||.|.:||||.:||||||||||||:|.||:||:||::.:|:|
 Frog   130 KAIEKNVLFAHLDDNERSDIFDAMFSVTYIAGETVIQQGDEGDNFYVVDQGEMDVYVNNDWMTSI 194

  Fly   277 SEGGSFGELALIYGTPRAATVRAKTDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESL 341
            .||||||||||||||||||||:|||:|||||||||||||||||||:|||||||||||:|||||||
 Frog   195 GEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESL 259

  Fly   342 DKWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEGCAVVLQQRSEQGEDPAEVGRLGSSDY 406
            ||||||||||:||...|:||:.||.||..||:|:|||||.|.|||:||| .|:..||||||.|||
 Frog   260 DKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSE-NEEFVEVGRLGPSDY 323

  Fly   407 FGEIALLLDRPRAATVVARGPLKCVKLDRARFERVLGPCADILKRNITQYNSFVSLSV 464
            |||||||::||||||||||||||||||||.|||||||||:|||||||.||||||||||
 Frog   324 FGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQYNSFVSLSV 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 103/125 (82%)
CAP_ED 219..328 CDD:237999 88/108 (81%)
Crp 331..>442 CDD:223736 85/110 (77%)
CAP_ED 337..453 CDD:237999 90/115 (78%)
prkar1aNP_001025530.1 DD_RIalpha_PKA 13..62 CDD:213048 12/56 (21%)
CAP_ED 137..246 CDD:237999 88/108 (81%)
CAP_ED 255..370 CDD:237999 90/115 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4802
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37664
Inparanoid 1 1.050 539 1.000 Inparanoid score I1159
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 1 1.000 - - otm48545
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X421
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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