DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and prkg1b

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_009304717.2 Gene:prkg1b / 566430 ZFINID:ZDB-GENE-080225-40 Length:684 Species:Danio rerio


Alignment Length:344 Identity:117/344 - (34%)
Similarity:177/344 - (51%) Gaps:18/344 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 RSLQIHLSTLAREREQ--------ELELERQRE--REEQVKLDASRQVISPDDCEDLSPMPQTAA 173
            |.||..|.....|..|        ||||:::.|  ::.|.:||..|.||.|   .......|:|.
Zfish     5 RDLQYALQEKIEELRQRDALIDELELELDQKDELIQKLQNELDKYRSVIRP---ATQQVHKQSAL 66

  Fly   174 PPVRR--RGGISAEPVT--EEDATNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDA 234
            ...:|  |..|||||..  .:|.::......||..::...:.:||..|....:|:.|:..:|.|.
Zfish    67 QEHQRTKRQAISAEPTAFDIQDLSHVTLPFYPKSPQSKELIKEAILDNDFMKNLELSQIQEIVDC 131

  Fly   235 MFPVNHIAGENIIQQGDEGDNFYVIDVGEVDVFVNSELVTTISEGGSFGELALIYGTPRAATVRA 299
            |:||.:.....||::||.|...||::.|:|:|......:.|:..|..|||||::|...|.|||:.
Zfish   132 MYPVEYDKESCIIKEGDVGSLVYVMEDGKVEVTKEGMKLCTMGPGKVFGELAILYNCTRTATVQT 196

  Fly   300 KTDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCSFDDGETI 364
            .|:||||.|||..::.|:|.:.:.|...|.|||..|...:.|.:.....:||.||...:.|||.|
Zfish   197 LTNVKLWAIDRQCFQTIMMRTGLIKHAEYMEFLKSVPTFQGLQEEILSKLADVLEETHYSDGEYI 261

  Fly   365 VKQGAAGDDFYIILEGCAVVLQQRSEQGEDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLK 429
            ::|||.||.|:||.:|...|.::.:..| .|..:..||..|:|||.||..:..|.|.|:|...:.
Zfish   262 IRQGARGDTFFIISKGKVNVTREDAPNG-TPVYLRALGKGDWFGEKALQGEDIRTANVIAAEAVT 325

  Fly   430 CVKLDRARFERVLGPCADI 448
            |:.:||..|:.::|...|:
Zfish   326 CLVIDRESFKHLIGGLDDV 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 48/125 (38%)
CAP_ED 219..328 CDD:237999 40/108 (37%)
Crp 331..>442 CDD:223736 40/110 (36%)
CAP_ED 337..453 CDD:237999 39/112 (35%)
prkg1bXP_009304717.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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