DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and pnpla6

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_005160109.1 Gene:pnpla6 / 560986 ZFINID:ZDB-GENE-050107-4 Length:1343 Species:Danio rerio


Alignment Length:400 Identity:81/400 - (20%)
Similarity:135/400 - (33%) Gaps:133/400 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 LSPMPQTAAPPVR--RRGGISAEPVTEEDATNYVKKVVPKDY----KTMNALSKAIAKNVLFAHL 223
            |||.| |.:.|||  :|.|....|....:|.  |:.....|:    .|:..||:.|:..|..|.:
Zfish   328 LSPHP-TRSSPVRHSKRFGSLTVPDKHREAA--VQNATGGDHGKEGGTIPTLSRTISMPVDIAGM 389

  Fly   224 DESERSDIFDAMFPVNHI----------------------------------------------- 241
            .:|.||| ||..:....|                                               
Zfish   390 QKSLRSD-FDMAYERGRISVSAEDGVPAFTKEQRERKVTVDEVPSGVYLYPEEESGMDIFSSFQG 453

  Fly   242 ------------------------------------AGENIIQQGDEGDNFYVIDVGEVDVFV-- 268
                                                ||..:.:|||:..:.:.:..|.:.|:.  
Zfish   454 RPNATVFEEAQKEILRLMKIEDPSLLNGRVTFHHAKAGSVLARQGDQDVSLHFVLSGCLHVYQKM 518

  Fly   269 --NSELVT--TISEGGSFGELALIYGTPRAATVRAKTDVKLWGIDRDSYRRILMGSTIRKRKMYE 329
              ..|.|.  ....|...|:||::.|.|...|::|:.|.....|.:..:..|:       |:...
Zfish   519 IDKQEAVCLFVTQPGEMVGQLAVLTGEPLIFTIKAERDCTFLKISKSEFYEIM-------REQPS 576

  Fly   330 EFLS-------RVS-ILESLDKWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEG-CAVVL 385
            ..||       |:| .:..:|        .:::..:.:.|..:.:|....|..||:|.| ...|:
Zfish   577 VVLSAAHTVAIRMSAFVRQMD--------FAIDWMAVEAGRALYRQDDQSDCTYIVLNGRLRSVI 633

  Fly   386 QQRSEQGEDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLKCVKLD-------RARFERVLG 443
            ::.:.:.|   .||..|..|..|.:..|..:|||.||.|....:.|||.       :.|:.:|:.
Zfish   634 RKANGKKE---LVGEYGRGDLIGVVEALTRQPRATTVHAVRDTELVKLPEGTLNNIKRRYPQVVT 695

  Fly   444 PCADILKRNI 453
            ....:|.:.|
Zfish   696 RLIHLLGQKI 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 35/222 (16%)
CAP_ED 219..328 CDD:237999 29/197 (15%)
Crp 331..>442 CDD:223736 30/126 (24%)
CAP_ED 337..453 CDD:237999 28/123 (23%)
pnpla6XP_005160109.1 TM_EGFR-like 31..64 CDD:213052
Crp 164..>302 CDD:223736
CAP_ED 170..291 CDD:237999
Crp 466..>596 CDD:223736 25/136 (18%)
CAP_ED 467..577 CDD:237999 21/116 (18%)
CAP_ED 590..698 CDD:237999 28/118 (24%)
Crp 605..>706 CDD:223736 27/103 (26%)
Pat_PNPLA6_PNPLA7 921..1226 CDD:132864
RssA 926..1216 CDD:224666
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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