DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-R1 and pnpla7b

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_692276.5 Gene:pnpla7b / 503936 ZFINID:ZDB-GENE-050309-66 Length:1340 Species:Danio rerio


Alignment Length:437 Identity:83/437 - (18%)
Similarity:156/437 - (35%) Gaps:87/437 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GRGGRILRESSIDGGVAMFDALLRDDHEHRLSLDAVHRMRHVRTSCTTIPEEDAVSDRSLQIHL- 125
            |||.|  |.|..:..|:  |.:.:...:|......:.|....:.:||..|.......|||...| 
Zfish   339 GRGPR--RHSQTNEDVS--DKVPQRSSDHYSDTSHMSREDCGKLNCTESPTTLFRKSRSLSTPLE 399

  Fly   126 STLAREREQELELERQREREEQVKLDASRQVISPDDCEDLSPMPQTAAPPVRRRGGISAEPVTE- 189
            ||.|...:..:..:|..:.                     :|....|.....|:..::...... 
Zfish   400 STHAGSPDHNMTFDRSSKE---------------------APSSPIAIQKSNRKKSVTMHHSPSA 443

  Fly   190 ----EDATNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHI-AGENIIQQ 249
                .|...:...:   .:..:||:.:|..:::|  .:.:.:..::.:....:..: ||..:..:
Zfish   444 VFHYSDTGGHSSHI---HHSKVNAIFQAAKRDLL--KIIQLQDPNLLEDRVTLRQVKAGSVVASE 503

  Fly   250 GDEGDNFYVIDVGEVDVF---VNSE---LVTTISEGGSFGELALIYGTPRAATVRAKTDVKLWGI 308
            ||:..:...:..|.:.|:   ::.|   .:.....|...|.||::.|.|...:|||:.|.....|
Zfish   504 GDQDVSVQFVISGTLHVYQRLIDREEQSCLFVAHPGEMVGHLAVLTGEPLIFSVRAQRDCCFLSI 568

  Fly   309 DRDSYRRILMGSTIRKRKMYEEFLSRV-SILESLDKWERLTVADSLETCSFDDGETIVKQGAAGD 372
            .:..:..|:.........:....:.|| |.:..:|        .:|:..:.:.|..:.:||...|
Zfish   569 SKTHFYEIMRAEPRMVLNVAHTVVRRVSSFVRQID--------FALDWMALEAGRAVYRQGDKSD 625

  Fly   373 DFYIILEGCAVVLQQRSEQGEDPAE---VGRLGSSDYFGEIALLLDRPRAATVVA---------- 424
            ..:|:|.|     :.||...:|..:   .|..|..|..|.:..|....||.||.|          
Zfish   626 STFIVLSG-----RLRSVIMKDDGKKELAGEYGRGDLIGVVEALTHLNRATTVHAVRDSELAKLP 685

  Fly   425 RGPLKCVK---------LDRARFERVLGPCADILKRNITQYNSFVSL 462
            .|.|..:|         |.....:::||        |:.|.|..:|:
Zfish   686 EGALNSIKRKYPQVVTRLIHLLGQKILG--------NMQQVNGPLSV 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 24/133 (18%)
CAP_ED 219..328 CDD:237999 20/115 (17%)
Crp 331..>442 CDD:223736 29/133 (22%)
CAP_ED 337..453 CDD:237999 28/137 (20%)
pnpla7bXP_692276.5 Crp 164..354 CDD:223736 7/18 (39%)
CAP_ED 170..291 CDD:237999
Crp 470..>602 CDD:223736 23/133 (17%)
CAP_ED 473..583 CDD:237999 20/111 (18%)
Crp 596..>718 CDD:223736 30/142 (21%)
CAP_ED 596..704 CDD:237999 26/120 (22%)
Pat_PNPLA6_PNPLA7 927..1232 CDD:132864
RssA 932..1234 CDD:224666
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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