DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and Pnpla6

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_008767227.2 Gene:Pnpla6 / 360753 RGDID:1564611 Length:1356 Species:Rattus norvegicus


Alignment Length:356 Identity:80/356 - (22%)
Similarity:148/356 - (41%) Gaps:47/356 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 SLQIHLSTLAREREQELELERQREREEQVKLDASRQVISPDDCEDLSPMPQTAAP--PVR----R 178
            |:.:.:|.|......:.::..:|.|     :..|.|       |:.|..||||:|  |.:    :
  Rat   405 SMPVDISGLQGGPRSDFDMAYERGR-----ISVSLQ-------EEASGGPQTASPRTPTQELREQ 457

  Fly   179 RGGISAEPVTEEDATNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHI-A 242
            ..|.......|:::........|...:..:::.:| ||..| |.|...|...:.::...::|. |
  Rat   458 PAGACEYSFCEDESATGGCPFGPYQGRQTSSIFEA-AKREL-AKLMRIEDPSLLNSRVLLHHAKA 520

  Fly   243 GENIIQQGDEGDNFYVIDVGEVDVFVN-----SELVTTISEGGSF-GELALIYGTPRAATVRAKT 301
            |..|.:|||:..:.:.:..|.:.|:..     .|:...:::.|.. |:||::.|.|...|:||:.
  Rat   521 GTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEEVCLFVAQPGELVGQLAVLTGEPLIFTLRAQR 585

  Fly   302 DVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVS-ILESLDKWERLTVADSLETCSFDDGETIV 365
            |.....|.:..:..|:...............:|:| .:..:|        .:::..:.:.|..:.
  Rat   586 DCTFLRISKSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMD--------FAIDWTAVEAGRALY 642

  Fly   366 KQGAAGDDFYIILEG-CAVVLQQRSEQGEDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLK 429
            :||...|..||:|.| ...|:|:.|.:.|   .||..|..|..|.:..|..:|||.||.|....:
  Rat   643 RQGDRSDCTYIVLNGRLRSVIQRGSGKKE---LVGEYGRGDLIGVVEALTRQPRATTVHAVRDTE 704

  Fly   430 CVKLD-------RARFERVLGPCADILKRNI 453
            ..||.       :.|:.:|:.....:|.:.|
  Rat   705 LAKLPEGTLGHIKRRYPQVVTRLIHLLSQKI 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 31/133 (23%)
CAP_ED 219..328 CDD:237999 26/115 (23%)
Crp 331..>442 CDD:223736 30/119 (25%)
CAP_ED 337..453 CDD:237999 30/123 (24%)
Pnpla6XP_008767227.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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