DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-R1 and Prkg2

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_037144.1 Gene:Prkg2 / 25523 RGDID:3401 Length:762 Species:Rattus norvegicus


Alignment Length:381 Identity:104/381 - (27%)
Similarity:193/381 - (50%) Gaps:48/381 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 VSDRSLQIHLSTLARE-REQELELERQREREEQVKLDASRQVIS--------PDDCEDLSPM--- 168
            :|:.:|:..::.|.|| :.::.||:.:....::::...::|.::        ...|..|:.:   
  Rat    21 LSNEALRSKVAELEREVKRKDAELQEREYHLKELREQLAKQTVAIAELTEELQSKCIQLNKLQDV 85

  Fly   169 -------PQTAAP---PV-------------RRRG---GISAEPVTEEDATN------YVKKVVP 201
                   |..|:|   |:             .|||   |:||||.:.....|      :.|..|.
  Rat    86 IHVQGGSPLQASPDKVPLDVHRKTSGLVSLHSRRGAKAGVSAEPTSRTYDLNKPPEFSFEKARVR 150

  Fly   202 KDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIAGENIIQQGDEGDNFYVIDVGEVDV 266
            ||......::.|:.||.....||..:..|:.:.|:..|:..|..|::||:.|::.:|:..|.::|
  Rat   151 KDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIVKQGEPGNHIFVLAEGRLEV 215

  Fly   267 FVNSELVTTISEGGSFGELALIYGTPRAATVRAKTDVKLWGIDRDSYRRILMGSTIRKRKMYEEF 331
            |...:|:::|....:|||||::|...|.|:|:|.|:||.|.:||:.::.|:..:...:.:.|..|
  Rat   216 FQGEKLLSSIPMWTTFGELAILYNCTRTASVKAITNVKTWALDREVFQNIMRRTAQARDEEYRNF 280

  Fly   332 LSRVSILESLDKWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEGCAVVLQQRSEQGED-P 395
            |..||:|::|.:.:...:.|.||...:|.|:.|:::|..|..|:|:.:|...|.|  |.:|.| |
  Rat   281 LRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTFFILAKGKVKVTQ--STEGHDQP 343

  Fly   396 AEVGRLGSSDYFGEIALLLDRPRAATVVA-RGPLKCVKLDRARFERVLGPCADILK 450
            ..:..|...:||||.||:.|..|:|.::| ...:.|:.:||..|.:.:|...::.|
  Rat   344 QLIKTLQKGEYFGEKALISDDVRSANIIAEENDVACLVIDRETFNQTVGTFDELQK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 41/125 (33%)
CAP_ED 219..328 CDD:237999 33/108 (31%)
Crp 331..>442 CDD:223736 38/112 (34%)
CAP_ED 337..453 CDD:237999 36/116 (31%)
Prkg2NP_037144.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..138 8/25 (32%)
Crp 162..>285 CDD:223736 39/122 (32%)
cGMP-binding, high affinity, cAMP-binding, moderate affinity. /evidence=ECO:0000250|UniProtKB:Q13237 168..283 36/114 (32%)
CAP_ED 168..273 CDD:237999 33/104 (32%)
cGMP-binding, high affinity, cAMP-binding, low affinity. /evidence=ECO:0000250|UniProtKB:Q13237 286..416 36/116 (31%)
CAP_ED 286..401 CDD:237999 36/116 (31%)
PTZ00263 417..752 CDD:140289
STKc_cGK 459..718 CDD:270724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 740..762
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.