DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and prkg2

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_002934043.3 Gene:prkg2 / 100497736 XenbaseID:XB-GENE-951552 Length:787 Species:Xenopus tropicalis


Alignment Length:409 Identity:113/409 - (27%)
Similarity:203/409 - (49%) Gaps:70/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 TSCTTIPEEDAVSDR--SLQIHLSTLAREREQELELERQ--REREEQVKLDASRQVI-------- 157
            :||..:...|.|.::  .|:|.|    ::::::|:.:.|  :|.:||:|  ...|||        
 Frog    24 SSCNKLRNADTVKNKVWELEIEL----KKKDEKLKNKEQIFQELQEQIK--KQNQVIEEMAEELQ 82

  Fly   158 ---------------------SPDDCEDLSPMPQT---AAP-------PV-----------RRRG 180
                                 :||..:.|.|.|..   |.|       |:           :|:|
 Frog    83 NKCVQLNKLQVVVQTQNGISTTPDLHKMLQPSPTKTLHALPTKSLKGSPLKTFSGLFSNSNKRKG 147

  Fly   181 ---GISAEPVTEEDA-----TNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFP 237
               |:||||.:..|.     .::.|..|.|:......:|.|:.||.....:|..:..|:.:.|:.
 Frog   148 AKEGVSAEPTSRYDGGDHPRFSFEKARVRKNTSEKILISDALNKNQFMKRMDHHQIQDMVECMYE 212

  Fly   238 VNHIAGENIIQQGDEGDNFYVIDVGEVDVFVNSELVTTISEGGSFGELALIYGTPRAATVRAKTD 302
            ..::.||.||:||:.|...:|:..|:.:||..::|:|:|....:|||||::|...|.|:|:|.|.
 Frog   213 RIYLQGEFIIRQGEPGSQIFVLADGKAEVFQENKLLTSIPVWTTFGELAILYNCTRTASVKAITG 277

  Fly   303 VKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCSFDDGETIVKQ 367
            |:.|.:||:.::.|:..:...|.:.|..||..|.:|:.|.:.:.:.:||.||...::..:.|:::
 Frog   278 VRTWTLDREVFQNIMRKTAQSKHEEYLSFLKSVPLLKELPEHKLMKIADCLELEFYEMDDYIIRE 342

  Fly   368 GAAGDDFYIILEGCAVVLQQRSEQGEDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGP-LKCV 431
            |..|..|:||.:| .|.:.|.:|..::|..:..|...|||||.||:.|..|:|.::|.|. ::|:
 Frog   343 GEEGSTFFIISKG-KVKVTQSTEGYKEPQYIKFLEKGDYFGEKALISDDVRSANILAYGDRVECL 406

  Fly   432 KLDRARFERVLGPCADILK 450
            .:||..|.:.:|...:::|
 Frog   407 VMDRETFNKTVGTYEELMK 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 41/125 (33%)
CAP_ED 219..328 CDD:237999 34/108 (31%)
Crp 331..>442 CDD:223736 37/111 (33%)
CAP_ED 337..453 CDD:237999 36/115 (31%)
prkg2XP_002934043.3 CAP_ED 194..303 CDD:237999 34/108 (31%)
CAP_ED 312..427 CDD:237999 36/115 (31%)
STKc_cGK 484..743 CDD:270724
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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