DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-R1 and prkar2b

DIOPT Version :9

Sequence 1:NP_001189150.1 Gene:Pka-R1 / 40305 FlyBaseID:FBgn0259243 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_002933139.3 Gene:prkar2b / 100495356 XenbaseID:XB-GENE-1000037 Length:405 Species:Xenopus tropicalis


Alignment Length:338 Identity:132/338 - (39%)
Similarity:188/338 - (55%) Gaps:32/338 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 EQELELERQREREEQVKLDASRQVISPDDCEDLSPMPQTAAPPVR---RRGGISAEPVT--EEDA 192
            |:.::.:.:...||:           .||.||.      .||.:.   ||..:.||...  |||.
 Frog    67 EEPMQTDSENGEEEE-----------DDDEEDF------VAPVINRFSRRASVCAEAYNPDEEDD 114

  Fly   193 TNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIAGENIIQQGDEGDNFY 257
            ....|.:.||.....|.|.:|....:||..||:.:.|.:.||||......||::|.|||:|||||
 Frog   115 DTETKVIYPKTDDQRNRLQEACKDILLFKSLDQEQMSQVLDAMFEKLVKCGEHVIDQGDDGDNFY 179

  Fly   258 VIDVGEVDVFVNSE----LVTTISEGGSFGELALIYGTPRAATVRAKTDVKLWGIDRDSYRRILM 318
            |||.|..|:||.|:    .|......||||||||:|.||||||:.|.:...:||:||.::|||::
 Frog   180 VIDRGTYDIFVKSDGVVRCVGAYDNRGSFGELALMYNTPRAATIVATSVGSIWGLDRATFRRIIV 244

  Fly   319 GSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEGCAV 383
            .:..:|::|||.|:..:..|:||:..|||.|.|.:.|.::.|||.|:.||...|.|||:..| .|
 Frog   245 KNNAKKKRMYENFIESLPFLKSLEFSERLKVVDVIGTKTYYDGEQIIAQGDGADSFYIVESG-EV 308

  Fly   384 VLQQRSEQGED-----PAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVLG 443
            .:..:|:...|     ..|:.|.....||||:||:.::||||:..|.|.:||:.:|...|||:||
 Frog   309 RINMKSKSKPDAETNEAVEIARCTRGQYFGELALVTNKPRAASAYAVGNVKCLVMDVQAFERLLG 373

  Fly   444 PCADILKRNITQY 456
            ||.:|:||||..|
 Frog   374 PCMEIMKRNIANY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-R1NP_001189150.1 Crp 213..>339 CDD:223736 58/129 (45%)
CAP_ED 219..328 CDD:237999 53/112 (47%)
Crp 331..>442 CDD:223736 44/115 (38%)
CAP_ED 337..453 CDD:237999 50/120 (42%)
prkar2bXP_002933139.3 DD_RIIbeta_PKA 3..43 CDD:213051
CAP_ED 141..254 CDD:237999 53/112 (47%)
CAP_ED 263..383 CDD:237999 50/120 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54324
OrthoDB 1 1.010 - - D1047290at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.960

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