DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3618 and Fam234b

DIOPT Version :9

Sequence 1:NP_001189143.1 Gene:CG3618 / 40303 FlyBaseID:FBgn0037028 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_038963837.1 Gene:Fam234b / 362455 RGDID:1306151 Length:670 Species:Rattus norvegicus


Alignment Length:720 Identity:143/720 - (19%)
Similarity:230/720 - (31%) Gaps:280/720 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GIYAPLSQAMSDSESDEEIEIHNAANHRQKLQQKLKQAHQPSPPEQLQAQRIRIPPNTLALKSPH 78
            |.|.||:||.|| ||::::.::        ||||                               
  Rat    44 GEYDPLTQADSD-ESEDDLVLN--------LQQK------------------------------- 68

  Fly    79 TRASPTATRIVTRKPSGSTQKFQLEGSSYATNMQNTFRSVMLSDNGGVGSELSHFNS--DFDANA 141
                                                        ||||.:..|....  :.|::|
  Rat    69 --------------------------------------------NGGVKNGKSALGDPPEPDSDA 89

  Fly   142 DNVAILGDHNQTGEDLSKRTP-------------------MSPARKCCFIGSLLLCFLAVVSFVW 187
            |.......|      ||:.||                   :|..|...|:.:|::..:.|:...:
  Rat    90 DVAGASKPH------LSEVTPEGFPSEPLGGLEQKATSSLVSYVRTSVFLLTLVISMVLVLLCAF 148

  Fly   188 LVPC----------------GNPDGTGSCPAVGDRIKTHNWFNNYTKAELKGGINVVGGLRAWEN 236
            |:||                |.|.....|...||          .:..|| ..:| ..|||    
  Rat   149 LIPCPPRDLHSTWSRRLGSQGGPFCFIMCTPGGD----------LSPLEL-ADVN-RDGLR---- 197

  Fly   237 NLIFMYRGDAF--FPEFRPGNERRNG------IICLIGSSGAVAWFVEMVDEPVALDCTLID-ID 292
                    |..  |...|.|.|...|      ::||.|.:|:..|...:.:|  |.|.|.:| |.
  Rat   198 --------DVLLTFVTTRNGTEGGGGSQPTADLVCLSGMNGSTLWSSPLPEE--AQDVTCLDLIP 252

  Fly   293 GN-GKPACLVLDEYGELGAIHPVSGEWIWWHKERSARKVDAYDFPVILPDLDADGVLDLLLVTSL 356
            |: .|..|||......|.|.:..||:.:|................|:|||||.|||.||::   |
  Rat   253 GSVAKTICLVTGTRKMLSAFNATSGKILWTLNPNYLSNGTLAAPVVVLPDLDEDGVRDLVV---L 314

  Fly   357 SLVQRTKSLAQLKHESPEKLEARNVLRMLSGRRGAPIGD--GFTIHDCDTLSN------------ 407
            ::.:....|..|               ::|||.|:|:|.  .:.|.....|..            
  Rat   315 AIGELQPDLCFL---------------LVSGRTGSPVGRPVKYNIVGVGNLIGPQVYITASGAVY 364

  Fly   408 LKLEAGNVSFTCQRVNDTEQQRSKSLAELYALITNK--SIVSQRLGTSKISQHRNHGQRRELDAQ 470
            :....||:             ::.:|.:::....|:  |..|.::...:..:||:......:|  
  Rat   365 ILFGFGNI-------------QAVALRDIFVQAQNRDSSPPSLQIEEPEWEKHRSVNLSELID-- 414

  Fly   471 RNIYSLSGRELVVENRGRCPEDCNVTFVLSEVRDG---------KPHVVENFITSRMYGMK--PA 524
              :|| .|.||:  ...:.| |.|.:.:|...|.|         .||...|     :.|::  |.
  Rat   415 --VYS-DGVELL--QLVKAP-DSNSSSLLITTRQGLVLLRGQDLTPHWKLN-----LQGLRSQPT 468

  Fly   525 EWHFKNTKSQMSGFVMKFWKWHGLAKPSKQTSASSNSNNVQKS----GSNNHTKNMNAIKDKEKS 585
            ..:|  |..|...|:::.....|:   .|.|....:|.::..|    .....|...:||...:||
  Rat   469 PGYF--TDDQTLDFLLQTQDGVGM---KKMTVVDGSSGSIVWSYRVPCHVKETPTTSAITSDQKS 528

  Fly   586 QAQAKKQQQHQRLRRSTEAKDQEFQPAHQEFDFFEHVKQKRESFGLPSSTMNLTKSSGISPGGSY 650
                                         .|.|:..        .|.:::::...|||..|.|.|
  Rat   529 -----------------------------VFLFWAE--------ALTAASLSSDDSSGAEPSGLY 556

  Fly   651 KMNMI 655
            .:.::
  Rat   557 HLYLL 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3618NP_001189143.1 None
Fam234bXP_038963837.1 assembly_YfgL <201..>319 CDD:274511 38/122 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341615
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28P1T
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21419
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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