DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3618 and Fam234a

DIOPT Version :9

Sequence 1:NP_001189143.1 Gene:CG3618 / 40303 FlyBaseID:FBgn0037028 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001009701.1 Gene:Fam234a / 360502 RGDID:1311484 Length:552 Species:Rattus norvegicus


Alignment Length:458 Identity:92/458 - (20%)
Similarity:165/458 - (36%) Gaps:127/458 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LSDNGGVGSELSHFNSDFDANADNVAILGDHNQTGEDL-SKRTP--MSPARKCCFIGSLLLCFLA 181
            :.|:..:.:|:....::...:.:|   ||:..:|.::| :|..|  :|..|...|..||.:|...
  Rat     1 MMDDKDLEAEIHPLKNEDKKSQEN---LGNLPKTEDNLKNKPVPSRLSRCRTVAFFLSLFICLFV 62

  Fly   182 VVSFVWLVPCGNPDGTGSCPAVGDRIKTHNWFNNYTKAELKGGINVVGGLRAWENNLIFMYRGDA 246
            |....:::||  ||.    |:..|:     |..:|..|.....:.:....|....:::|:|:.. 
  Rat    63 VFVLSFIIPC--PDR----PSSEDK-----WRLDYDYAVTYDFLALGDVDRDEVQDVLFLYKNT- 115

  Fly   247 FFPEFRPGNERRNG---------------IICLIGSSGAVAWFVEMVDEPVALDCTLIDI----- 291
                    |...|.               :..:.|::|.|.|     :.|:|.|...:..     
  Rat   116 --------NSSNNSTRSCADEGFSTPCTFMAAVSGTNGTVLW-----ERPLAQDVAHVKCAVPQT 167

  Fly   292 -DGNGKPACLVLDEYGELGAIHPVSGEWIWWHKERSARKVDAYDFPVILPDLDADGVLDLLLVTS 355
             |.....||:::...|...|::..:||.:|.|....:.........:.:||:|.||..|||:   
  Rat   168 RDSKVSSACVLVGRLGSFMAVNFFTGETLWSHPRSFSGNASILSPLLQVPDIDGDGAPDLLM--- 229

  Fly   356 LSLVQRTKSLAQLKHESPEKLEARNVLRMLSGRRGAPI---------GDGFTIHDCDTLSNLKLE 411
                        |..|..|...|     :.||..|..|         |||..:     |...:..
  Rat   230 ------------LSREGQEVSGA-----LYSGSTGYQIGHRGSLGVDGDGVAL-----LHVTRTG 272

  Fly   412 AGNVSFTCQRVNDTEQQRSKSLAELYALITNK-----------SIVSQRLGTSKISQHR----NH 461
            |..:...|     .......|:..||..||.:           :::::       |.||    :.
  Rat   273 AQYILLPC-----ASALCGVSVKGLYKRITGRDDHFKEDPSWENMLNR-------SAHRRLLHSS 325

  Fly   462 GQRRELDAQRNIYSLSGRELVVENRGRCPEDCNVTFVLSEVRDGKPHVVENFITSRMYGMKPAEW 526
            |..|.|   .|:...:|::|::.:    .|||       ::.||:..|....:.:.....||...
  Rat   326 GAVRYL---MNVPGKTGQDLLLVS----SEDC-------KLLDGQDLVPRWTLGATQVLRKPILG 376

  Fly   527 HFK 529
            |:|
  Rat   377 HYK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3618NP_001189143.1 None
Fam234aNP_001009701.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40 8/41 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21419
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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