DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3618 and fam234b

DIOPT Version :9

Sequence 1:NP_001189143.1 Gene:CG3618 / 40303 FlyBaseID:FBgn0037028 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_996936.1 Gene:fam234b / 324587 ZFINID:ZDB-GENE-030131-3308 Length:628 Species:Danio rerio


Alignment Length:579 Identity:117/579 - (20%)
Similarity:185/579 - (31%) Gaps:219/579 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GIYAPLSQAMSDSESDEEIEIHNAANHRQKLQQKLKQAHQPSPPEQLQAQRIRIPPNTLALKSPH 78
            |.|.||:||.|:.|::::..:.|..  |..|::   |..:|.|..:.|.                
Zfish    20 GEYDPLTQADSEDETEDDDLVLNYP--RNGLRE---QGEEPDPQWRAQV---------------- 63

  Fly    79 TRASPTATRIVTRKPSGSTQKFQLEGSSYATNMQNTFRSVMLSDNGGVGSELSHFNSDFDANADN 143
              |.|           |..|                         ||          |.:..|.:
Zfish    64 --AGP-----------GRAQ-------------------------GG----------DSEQKAGH 80

  Fly   144 VAILGDHNQTGEDLSKRTPMSPARKCCFIGSLLLCFLAVVSFVWLVPC--GNPDGTGSCPAVGDR 206
            |...|                  |...|:..||...|.|:...:|:||  |.|..|....|:||.
Zfish    81 VQGAG------------------RSAAFLLPLLSAMLLVLLCAFLIPCPQGAPQLTHWRKALGDA 127

  Fly   207 IKTHN-----WFNNYTKAELKGGINVVGGLRAWENNLIFMYRGDAFFPEFRPGNERRN--GIICL 264
            ....:     |       ::.|     .||   |:.||.:   .:...:.:|.|.:..  .:..:
Zfish   128 AGVTSPPLAMW-------DVDG-----DGL---EDVLIAV---TSIANDSQPINSQNKEFSVSAV 174

  Fly   265 IGSSGAVAWFVEMVDEPVALDCTLIDIDGN--------GKPACLVLDEYGELGAIHPVSGEWIWW 321
            .|:.|.:.|...:.:..:::.|.|.....:        ...||:::.. |.:..::..:|. .||
Zfish   175 SGAGGQLLWSRTLREPLISVQCGLQTASADPLQRTSEQTHSACILISS-GHIITVNASTGR-TWW 237

  Fly   322 HKERSARKVDAYDFPVILPDLDADGVLDLLLVT-------SLSLVQRTKSLAQLKHESPEKLEAR 379
                :|...|.....|:||||..|...|||:.|       .||||                    
Zfish   238 ----TAAVGDVESHAVLLPDLQGDAYPDLLIATLPADQASDLSLV-------------------- 278

  Fly   380 NVLRMLSGRRGAPIGD-------------GFTIHDCD-----TLSNLKLEAG-NVSF-------- 417
                ::||:.||.||.             |..:|:..     .|..|.|..| ::|:        
Zfish   279 ----LISGQSGAVIGQPVNFNLTAQGKLIGPLLHETSKGAYYILFGLGLVQGVSLSYIYTQATGG 339

  Fly   418 TCQRVNDTEQQRSKSLAELYALITNKSIVSQRLGTSKISQHRNH---------GQRRELDAQRNI 473
            |..||    .|:..|...|     .:|..|..|..|.:|:....         .||.:||.    
Zfish   340 TAARV----LQQDSSWESL-----RRSNTSALLHISSVSEQVEFLLPLVAGQCDQRSDLDG---- 391

  Fly   474 YSLSGRELVVENRGRCPED--CNVTFVLSEVRDGKPHVVENFITSRMYGMKPAEWHFKN 530
                   :.|.||.|....  |... .||.:|....|...:...:.:: .:||..||.:
Zfish   392 -------VCVLNRSRSEGIVLCGAR-RLSVLRASDTHTTWSLSLANIH-TRPALGHFND 441



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581590
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28P1T
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21419
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.800

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