DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HIPP1 and hadhab

DIOPT Version :10

Sequence 1:NP_649261.1 Gene:HIPP1 / 40302 FlyBaseID:FBgn0037027 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001082906.1 Gene:hadhab / 793834 ZFINID:ZDB-GENE-041111-204 Length:763 Species:Danio rerio


Alignment Length:247 Identity:56/247 - (22%)
Similarity:92/247 - (37%) Gaps:52/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   699 LLEQLNDTLSSVARKGEFNTV-LLTVEGPQFCQGIDCQELI----QGSLEKRKDSASQL------ 752
            |:.||.|||....:..|..|: .|.....:..:|:..:::.    :|.::|.:|.....      
Zfish   217 LVHQLVDTLGPGLKSPEERTIEYLEEVAVEAARGLAQKKITLTKEKGWMQKIQDYVMSYPFVRQQ 281

  Fly   753 ---AVALKCYLRTLATFPKPLVAGIVGSQINLGVMQLPFADYVVASDDCSFETNYAKLGQLPEGY 814
               .|..|...:|...:|.||  .|:.| :..||.|.|...|:|.|.      .:.||....|..
Zfish   282 IYNTVEKKVMKQTKGLYPAPL--KIIES-VKAGVEQGPTTGYLVESQ------QFGKLAMTNESK 337

  Fly   815 A---LWHGHQRV--------SSEVHSRLFLMGERLFATELLESNSFVDK----ICKARNVNEMAL 864
            |   |:||....        ..||.: |.::|..|....:.:..  |||    |.|...|:.::.
Zfish   338 ALIGLYHGQVACKKNRFGTPEKEVKT-LAILGAGLMGAGIAQVT--VDKGIHTILKDTTVDGLSR 399

  Fly   865 A----------KAKQISTSSAEMYRTLKKLNHSAVNVTKFPRLDEELKVIGE 906
            .          |.|:.|.:|.|....|..|. ..::...|.:.|..::.:.|
Zfish   400 GEQQVFKGLNDKTKKKSLTSFERDTFLSNLT-GQLDYNGFNKADMIIEAVFE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPP1NP_649261.1 PTZ00449 <148..580 CDD:185628
crotonase-like 673..870 CDD:119339 48/209 (23%)
hadhabNP_001082906.1 fa_ox_alpha_mit 27..762 CDD:131494 56/247 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.