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Protein Alignment HIPP1 and Cdyl2

DIOPT Version :10

Sequence 1:	NP_649261.1	Gene:	HIPP1 / 40302	FlyBaseID:	FBgn0037027	Length:	926	Species:	Drosophila melanogaster
Sequence 2:	NP_083717.1	Gene:	Cdyl2 / 75796	MGIID:	1923046	Length:	503	Species:	Mus musculus

Alignment Length:	459	Identity:	95/459 - (20%)
Similarity:	198/459 - (43%)	Gaps:	50/459 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   499 NMIHAVEHEQRELSGGEVSNKPLMR-KRAMTITGRNQAARVAVEPTPPKKESAQSAAKRTPADSV 562
            |.:| :..::|..||.:.....|:| .|.:.:      .|::..|..|.| |..|:.||...:|.
Mouse    56 NGLH-LSKDKRVKSGKQAGASKLLRDARGLPV------ERLSHRPLEPGK-SKPSSHKRKRVNSP 112

  Fly   563 FTKATANTSARKP-RASDSWDYVYKQRASE---ESMIMRRRSNSSYSSNASVSRN---------- 613
            .::....:|.:.| ||:.:..|    |.:.   :.|.:::..|...:.:|...::
Mouse   113 LSRPKKGSSGKAPDRATKTVSY----RTTPSGLQIMPLKKAQNGLENGDAGSEKDESHFGNGSHQ 173

  Fly   614 ---SLDNRPGAANLSD---------DAGEGS---DPSFKFVKPVSKSSQRGGEDTSSHTLANDMK 663
               .|:::.|....||         :.|.||   :.......||.:..:...:......|...::
Mouse   174 PDLELNDQLGEQEASDCDGTHSALVENGVGSALTNGGLNLHSPVKRKLETEKDYVFDKRLRYSVR 238

  Fly   664 ANNGS---ELVCLHKVNKVAHLVIHTERGNFGHTYSKQLLEQLNDTLSSVARKGEFNTVLLTVEG 725
            .|..:   ..:.:.|.....|:::.::..: .:..:.::::::...|.:.| ..:...:||:..|
Mouse   239 QNESNCRFRDIVVRKEEGFTHILLSSQTSD-NNALTPEIMKEVRRALCNAA-TDDSKLLLLSAVG 301

  Fly   726 PQFCQGIDCQELI-QGSLEKRKDSASQLAVALKCYLRTLATFPKPLVAGIVGSQINLGVMQLPFA 789
            ..||.|:|...|| :.|.::||:| :::|.|::.:::....|.||:|..|.|..:.||...||..
Mouse   302 SVFCSGLDYSYLIGRLSSDRRKES-TRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLC 365

  Fly   790 DYVVASDDCSFETNYAKLGQLPEGYALWHGHQRVSSEVHSRLFLMGERLFATELLESNSFVDKIC 854
            |.|.||:...|:|.||.:...|.|.:.:...|.:...:.:.:...|.:|.|.|.. |...|.::.
Mouse   366 DIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEAC-SRGLVSQVF 429

  Fly   855 KARNVNEMALAKAKQISTSSAEMYRTLKKLNHSAVNVTKFPRLDEELKVIGEQWVTADCLANFKR 919
            .....::..:.:.|::::.||.:....|.|..|.:........::|..::.:.|.::..|.:...
Mouse   430 WPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEEVNEKECVMLKQLWSSSKGLDSLFS 494

  Fly   920 YLND 923
            ||.|
Mouse   495 YLQD 498

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.