DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIPP1 and Auh

DIOPT Version :10

Sequence 1:NP_649261.1 Gene:HIPP1 / 40302 FlyBaseID:FBgn0037027 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001386179.1 Gene:Auh / 361215 RGDID:1306087 Length:315 Species:Rattus norvegicus


Alignment Length:212 Identity:46/212 - (21%)
Similarity:87/212 - (41%) Gaps:32/212 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 KVAHL--------VIHTERGNFGHTYSKQLLEQLNDTLSSVARKGEFNTVLLTVEGPQ-FCQGID 733
            :|.||        |:...|....::.||.||:.|:..:.::....:..|:::..|.|. ||.|.|
  Rat    54 RVRHLEEENRGIVVLGINRAYGKNSLSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD 118

  Fly   734 CQELIQGSLEKRKDSASQL---AVALKCYLRTLATFPKPLVAGIVGSQINLGVMQLPFA-DYVVA 794
            .:       |:.|..:|::   ...::..:..:|..|.|.:|.|.|..:. |.::|..| |..||
  Rat   119 LK-------ERAKMHSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALG-GGLELALACDIRVA 175

  Fly   795 SDDCSFETNYAKLGQLPEGYALWHGHQRVSSEVHSRLFLMGERLFATELLESN-----SFVDKIC 854
            :..........||..:|.|    .|.||:...:  .:.|..|.:|:..:|:..     ..:..:.
  Rat   176 ASSAKMGLVETKLAIIPGG----GGTQRLPRAI--GMALAKELIFSARVLDGQEAKAVGLISHVL 234

  Fly   855 KARNVNEMALAKAKQIS 871
            :.....:.|..||..::
  Rat   235 EQNQEGDAAYRKALDLA 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPP1NP_649261.1 PTZ00449 <148..580 CDD:185628
crotonase-like 673..870 CDD:119339 46/209 (22%)
AuhNP_001386179.1 crotonase-like 62..315 CDD:474030 43/204 (21%)
RNA-binding. /evidence=ECO:0000250|UniProtKB:Q13825 81..95 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.

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