DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIPP1 and Echs1

DIOPT Version :10

Sequence 1:NP_649261.1 Gene:HIPP1 / 40302 FlyBaseID:FBgn0037027 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_511178.1 Gene:Echs1 / 140547 RGDID:69330 Length:290 Species:Rattus norvegicus


Alignment Length:242 Identity:52/242 - (21%)
Similarity:89/242 - (36%) Gaps:40/242 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   699 LLEQLNDTLSSVARKGEFNTVLLTVEGPQFCQGIDCQELIQGSLEKRKDSASQLAVALKCYLRT- 762
            |:|:||..|.:.........::||.....|..|.|.:|:...:.:             .||... 
  Rat    65 LIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQ-------------DCYSGKF 116

  Fly   763 ------LATFPKPLVAGIVGSQINLGVMQLPFADYVVASDDCSFETNYAKLGQLPEGYALWHGHQ 821
                  :....||::|.:.|..:..|.......|.:.|.:...|......||.:|..    .|.|
  Rat   117 LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGA----GGTQ 177

  Fly   822 RVSSEVHSRL----FLMGERLFATELLESNSFVDKICKARNVNEMALAKAKQISTSSAEMYRTLK 882
            |::..|...|    .|.|:|:.|.:..:: ..|.||.....:.|.|:..|::|:.:|..:....|
  Rat   178 RLTRAVGKSLAMEMVLTGDRISAQDAKQA-GLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAK 241

  Fly   883 KLNHSAVNVTKFPRLDEELKVIGEQWVTAD-----------CLANFK 918
            :..::|..:|.......|.|:....:.|.|           ..||||
  Rat   242 ESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFK 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPP1NP_649261.1 PTZ00449 <148..580 CDD:185628
crotonase-like 673..870 CDD:119339 39/181 (22%)
Echs1NP_511178.1 crotonase-like 32..288 CDD:474030 50/240 (21%)
Blue background indicates that the domain is not in the aligned region.

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