DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARL3 and dnd

DIOPT Version :9

Sequence 1:NP_004302.1 Gene:ARL3 / 403 HGNCID:694 Length:182 Species:Homo sapiens
Sequence 2:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster


Alignment Length:177 Identity:116/177 - (65%)
Similarity:145/177 - (81%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNV 65
            |||||:||||:..|::|.||||||||||||||:|||||||||:.:|||.|||||||.:.||||||
  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNV 65

Human    66 WDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDL 130
            ||||||.||||||||||.|||:||||||..||.|..|.|.||.|:|.:.:|..|||||||||||:
  Fly    66 WDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDM 130

Human   131 LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 177
            ..|..|:|:||.::|..::.|.|:|::|:|:.|.|:::||:|||||:
  Fly   131 PDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNM 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARL3NP_004302.1 Arl3 3..176 CDD:206721 112/172 (65%)
dndNP_650995.1 Arl3 3..176 CDD:206721 112/172 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 237 1.000 Domainoid score I2331
eggNOG 1 0.900 - - E2759_KOG0074
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48276
Inparanoid 1 1.050 245 1.000 Inparanoid score I3295
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56336
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 1 1.000 - - FOG0003664
OrthoInspector 1 1.000 - - oto90057
orthoMCL 1 0.900 - - OOG6_104284
Panther 1 1.100 - - LDO PTHR45697
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2406
SonicParanoid 1 1.000 - - X2537
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.870

Return to query results.
Submit another query.