Protein Alignment Six4 and STM

DIOPT Version :9

• Sequence 1: NP_649256.1
• Gene: Six4 / 40297
• FlyBaseID: FBgn0027364
• Length: 392
• Species: Drosophila melanogaster
• Sequence 2: NP_176426.1
• Gene: STM / 842534
• AraportID: AT1G62360
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 430
• Identity: 83/430 - (19%)
• Similarity: 140/430 - (32%)
• Gaps: 136/430 - (31%)

  Fly    23 SSGGTSSDHSAVHQDNLSSPMAYGSLFLP---------------------NAGYRGNLSCKTVLQ 66
            |...::|...|...||...||....:.:|                     ...|:.:....:.|.
plant     3 SGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQSSSLF 67

  Fly    67 LDKFAPYEGVEKDHLLERRFQDITNDYDKSPPPTASTTPTHYPSLNSIIFENGSSGNLGDLNGNT 131
            |...||.:|.:.        :..::....|..|..|....|:   |.|:....:..:....:.:.
plant    68 LQSLAPPQGTKN--------KVASSSSPSSCAPAYSLMEIHH---NEIVAGGINPCSSSSSSASV 121

  Fly   132 KTDLCA------------GLQRSGGGLGGNAGSGGHLISNL--------TAAHNMSAVSSFPIDA 176
            |..:.|            ..|:        .|:...:::.|        .||.:|........|.
plant   122 KAKIMAHPHYHRLLAAYVNCQK--------VGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDP 178

  Fly   177 KMLQFSTDQIQCMCEAL-----QQKGDIEKLTTFL----CSL------PPSEFFKTNESVLRARA 226
            .:.||    ::..||.|     :.....::...||    |..      .||.|....|:     |
plant   179 GLDQF----MEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGET-----A 234

  Fly   227 MVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLGAVDKY---------R 282
            :...|.|...|              .||:.|.:.....::.| ::|:.|.....|         :
plant   235 IDRNNNGSSEE--------------EVDMNNEFVDPQAEDRE-LKGQLLRKYSGYLGSLKQEFMK 284

  Fly   283 LRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTN---RYPTPDEKKTLAKKTGLTLTQVSNWF 344
            .|||..|||              ::|..|.|.:..:   .||:..:|..||:.|||...|::|||
plant   285 KRKKGKLPK--------------EARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWF 335

  Fly   345 KNRRQRDRTPQQRPDIMSVLP---------VGQLDGNGFP 375
            .|:|:|...|.:  |:..|:.         :..:.||.||
plant   336 INQRKRHWKPSE--DMQFVVMDATHPHHYFMDNVLGNPFP 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Six4	NP_649256.1	SIX1_SD	181..290	CDD:293483	25/132 (19%)
		homeodomain	301..355	CDD:238039	18/56 (32%)
STM	NP_176426.1	KNOX1	121..156	CDD:397730	5/42 (12%)
		KNOX2	173..216	CDD:397731	9/46 (20%)
		ELK	262..283	CDD:397729	4/21 (19%)
		Homeobox_KN	302..341	CDD:399131	14/38 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	78	1.000	Inparanoid score	I2393
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050