DRSC/TRiP Functional Genomics Resources

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Protein Alignment Six4 and KNAT5

DIOPT Version :9

Sequence 1:NP_649256.1 Gene:Six4 / 40297 FlyBaseID:FBgn0027364 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_194932.1 Gene:KNAT5 / 829335 AraportID:AT4G32040 Length:383 Species:Arabidopsis thaliana


Alignment Length:391 Identity:87/391 - (22%)
Similarity:131/391 - (33%) Gaps:155/391 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 HLLE-------RRFQDITNDYDKSPPPTASTTPTHYPSLNSIIFEN-----------------GS 120
            |||.       |.|    .|..:.|||....:.|  |||.:..|.|                 ..
plant     7 HLLPPQEDLPLRHF----TDQSQQPPPQRHFSET--PSLVTASFLNLPTTLTTADSDLAPPHRNG 65

  Fly   121 SGNLGDLN-------------GNTKTDLCAGLQRSG----GGLGG--------NAGSGGH-LISN 159
            ..::.|.|             |..::::..|:...|    |.:||        .|....| :...
plant    66 DNSVADTNPRWLSFHSEMQNTGEVRSEVIDGVNADGETILGVVGGEDWRSASYKAAILRHPMYEQ 130

  Fly   160 LTAAH-----NMSAVSSFP-IDAKMLQFSTDQIQCMCEALQQKGDIEKLTTF-------LCSLPP 211
            |.|||     ..:.|...| |||::.|..|  :......|....|.::|..|       |||   
plant   131 LLAAHVACLRVATPVDQIPRIDAQLSQLHT--VAAKYSTLGVVVDNKELDHFMSHYVVLLCS--- 190

  Fly   212 SEFFKTNESVLRARAMVAYNLGQFHELYNLLE--THCFSIKYHVDLQNL---------------- 258
               ||  |.:            |.|...:.:|  |.|:.|:.  .||:|                
plant   191 ---FK--EQL------------QHHVCVHAMEAITACWEIEQ--SLQSLTGVSPSESNGKTMSDD 236

  Fly   259 -----------WFKAHYKEAEKVRG-RPLGAVDKYRL---RKKYPLPKTIWDGEETVYCFKEK-- 306
                       .|......::.:.| .||...::.|.   |.|..|...:..|      ||||  
plant   237 EDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQG------FKEKIV 295

  Fly   307 ------------------SRNALKDCYLTNR---YPTPDEKKTLAKKTGLTLTQVSNWFKNRRQR 350
                              :.:.||:.:.|:.   |||.::|..|.::|||.|.|::|||.|:|:|
plant   296 DIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 360

  Fly   351 D 351
            :
plant   361 N 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Six4NP_649256.1 SIX1_SD 181..290 CDD:293483 27/148 (18%)
homeodomain 301..355 CDD:238039 23/74 (31%)
KNAT5NP_194932.1 KNOX1 117..156 CDD:397730 11/38 (29%)
KNOX2 170..221 CDD:397731 17/72 (24%)
Homeobox_KN 321..360 CDD:399131 16/38 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 78 1.000 Inparanoid score I2393
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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