Protein Alignment Six4 and so

DIOPT Version :9

• Sequence 1: NP_649256.1
• Gene: Six4 / 40297
• FlyBaseID: FBgn0027364
• Length: 392
• Species: Drosophila melanogaster
• Sequence 2: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Alignment Length: 295
• Identity: 143/295 - (48%)
• Similarity: 184/295 - (62%)
• Gaps: 33/295 - (11%)

  Fly   100 TASTTPTHYPS--LNSIIFENGSSGNLGDLNGNTKT-DLCAGLQRSGGGLGG--------NAGSG 153
            ||..||.:.|:  ..|:...|.::.|....|.|..| |:.|   .:|||.||        |.|.|
  Fly    22 TARHTPPYSPTGLSGSVALHNNNNNNSSTSNNNNSTLDIMA---HNGGGAGGGLHLNSSSNGGGG 83

  Fly   154 GHLISNLTAAHNMSAVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFKTN 218
            |.::|. ..:.....:.||       .|:.:|:.|:||.|||.|:||:|..||.|||..:..:.|
  Fly    84 GGVVSG-GGSGGRENLPSF-------GFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLN 140

  Fly   219 ESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLGAVDKYRL 283
            ||||:|:|:||::.||:.|||.|||.|.||.:.|..||.||.||||.||||:||||||||.|||:
  Fly   141 ESVLKAKAVVAFHRGQYKELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRV 205

  Fly   284 RKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRR 348
            |:|:|||:||||||||.||||||||:.|:|.|..|.||:|.||:.||:.||||.|||||||||||
  Fly   206 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRR 270

  Fly   349 QRDR--------TPQQRPDIMSVLPVGQLDGNGFP 375
            ||||        |.:|..|..|   ..:::|:..|
  Fly   271 QRDRAAEHKDGSTDKQHLDSSS---DSEMEGSMLP 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Six4	NP_649256.1	SIX1_SD	181..290	CDD:293483	64/108 (59%)
		homeodomain	301..355	CDD:238039	39/61 (64%)
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	64/108 (59%)
		homeodomain	223..274	CDD:238039	36/50 (72%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467665
Domainoid	1	1.000	48	1.000	Domainoid score	I4491
eggNOG	1	0.900	-	-		E1_KOG0775
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	78	1.000	Inparanoid score	I2393
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1040044at2759
OrthoFinder	1	1.000	-	-		FOG0001063
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10390
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	8	7.900