DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11396 and pbpG

DIOPT Version :10

Sequence 1:NP_649255.1 Gene:CG11396 / 40296 FlyBaseID:FBgn0037022 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_416638.4 Gene:pbpG / 946662 ECOCYCID:EG12015 Length:310 Species:Escherichia coli


Alignment Length:269 Identity:47/269 - (17%)
Similarity:96/269 - (35%) Gaps:82/269 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SSSSASSTSSAPNMMSNTF---------VGFFQPPEYVETPEAG-----------------EDSI 72
            :.::|::|:|.|.:.|.:.         |.:...|:.|. |.|.                 ::.:
E. coli    25 AKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVR-PIASISKLMTAMVVLDARLPLDEKL 88

  Fly    73 KVGDDVRNLWELPRENEPGKLIMPGIHLQTDLADPISVAVTQHLGEAELSYRKILRVDDVTQDER 137
            ||     ::.:.|.        |.|::.:..|             .:|:|.:.:|.:..::.:.|
E. coli    89 KV-----DISQTPE--------MKGVYSRVRL-------------NSEISRKDMLLLALMSSENR 127

  Fly   138 GLRTLIH--AGCYRTAVNLTGRLLTIYGQGYGRSGQPAKHSPHSLQLW--FTRLALLAK----LG 194
            ...:|.|  .|.|:..:..........|....|..:|...|.|::...  .|:|.:.:|    :|
E. coli   128 AAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIG 192

  Fly   195 EFELLNAEAEPFGQLTSPDVFYDF-------YPEMYN---GKSG----SIACFSFRLLLAELPIY 245
            :   |:...|.....::|.....|       |.:.:|   .|:|    :..|...|.::...|:.
E. coli   193 Q---LSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVA 254

  Fly   246 LGKPHVALD 254
            |    |.:|
E. coli   255 L----VVMD 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11396NP_649255.1 TPR repeat 328..357 CDD:276809
TPR 329..>457 CDD:440225
TPR repeat 367..392 CDD:276809
TPR repeat 397..427 CDD:276809
pbpGNP_416638.4 pbpG 3..292 CDD:236952 47/269 (17%)
Blue background indicates that the domain is not in the aligned region.

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