DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11396 and TRAPPC12

DIOPT Version :9

Sequence 1:NP_649255.1 Gene:CG11396 / 40296 FlyBaseID:FBgn0037022 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001308031.1 Gene:TRAPPC12 / 51112 HGNCID:24284 Length:735 Species:Homo sapiens


Alignment Length:532 Identity:176/532 - (33%)
Similarity:259/532 - (48%) Gaps:66/532 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SHKI-SEYFANDPPSFFDELASKPKGNNLSTEGSSSSASSTSSAPNMMSNTFVGFFQPPEYVETP 65
            ||.: |::|.:...|.|..:::...|:.........:...|...|..::........||...| |
Human   216 SHSLASDFFDSFTTSAFISVSNPGAGSPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPE-P 279

  Fly    66 EAGEDSIKVGDD-----VRNLWELPRENE---PGK-----------------------LIMPGIH 99
            .|...::..|.|     ..::.|:.|.|:   ||:                       |.|||:.
Human   280 FAHIQAVFAGSDDPFATALSMSEMDRRNDAWLPGEATRGVLRAVATQQRGAVFVDKENLTMPGLR 344

  Fly   100 LQTDLADPISVAVTQHLGEAELSYRKILRVDDVTQDERGLRTLIHAGCYRTAVNLTGRLLTIYGQ 164
            ......|.:...:.:.|||...:.|::|..|.|.|...||:.||....:|.||:|.|||||.:||
Human   345 FDNIQGDAVKDLMLRFLGEKAAAKRQVLNADSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQ 409

  Fly   165 GYGRSGQPAKHSPHSLQLWFTRLALLAKLGEFELLNAEAEPFGQLTSPDVFYDFYPEMYNGKSGS 229
            |||:||....|:..||||||.|||||.|||.|:....|.||||.|..||::|::||.:|.|:.||
Human   410 GYGKSGLLTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGS 474

  Fly   230 IACFSFRLLLAELPIYLGKPHVALDRLSELHVTTREIKEHYLSLHNKAAEE-------------- 280
            :..||.|:|.|||..|||.|..:||||.::.....:|   ..:|....||:              
Human   475 MVPFSMRILHAELQQYLGNPQESLDRLHKVKTVCSKI---LANLEQGLAEDGGMSSVTQEGRQAS 536

  Fly   281 --FWQRRCERVLHSIINCGLMMKKFSMIDDIMEGTLLKRSNLSKEDRRSLYSAWGRIYLQIGDIF 343
              .|:.|..||::|:.||.|:||.:.:..:.....:    ....|....|.|..|||.||||||.
Human   537 IRLWRSRLGRVMYSMANCLLLMKDYVLAVEAYHSVI----KYYPEQEPQLLSGIGRISLQIGDIK 597

  Fly   344 GAEQKI----AVSRRLREINSAPDLRDLVDKGLIAVAKNDFPEAYVIFQKALHLDTGNTMILNNM 404
            .||:..    .|:::|..:..  .:..|::...:.:.:|:|.||:..|.:.|.:|..|.:..||.
Human   598 TAEKYFQDVEKVTQKLDGLQG--KIMVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNA 660

  Fly   405 GVCLLYAGKLKDAINLYERAINLNPQKSLNESLLVNLSTLYELESNNSKAKKYNLLRLINRYKPD 469
            .|||||.|||||::...|..:..:|:..|:||:|.||:|:|||||:.|..||..||..:...:.|
Human   661 AVCLLYLGKLKDSLRQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGD 725

  Fly   470 -LNISIEICLKL 480
             .|..   ||||
Human   726 SFNTQ---CLKL 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11396NP_649255.1 TPR repeat 328..357 CDD:276809 15/32 (47%)
TPR_11 367..429 CDD:290150 22/61 (36%)
TPR repeat 367..392 CDD:276809 6/24 (25%)
TPR repeat 397..427 CDD:276809 14/29 (48%)
TPR_1 400..430 CDD:278916 13/29 (45%)
TRAPPC12NP_001308031.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..204
SnAPC_2_like <61..134 CDD:287949
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..276 5/38 (13%)
TPR_12 544..612 CDD:290160 23/71 (32%)
TPR 1 545..578 8/36 (22%)
TPR repeat 546..573 CDD:276809 8/30 (27%)
TPR repeat 579..613 CDD:276809 14/33 (42%)
TPR 2 580..613 14/32 (44%)
TPR_12 581..652 CDD:290160 23/72 (32%)
TPR repeat 618..648 CDD:276809 6/31 (19%)
TPR 3 620..653 8/32 (25%)
TPR_11 622..685 CDD:290150 22/62 (35%)
TPR 4 654..687 14/32 (44%)
TPR repeat 654..678 CDD:276809 12/23 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146918
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2796
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H34805
Inparanoid 1 1.050 247 1.000 Inparanoid score I3276
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142416at2759
OrthoFinder 1 1.000 - - FOG0006235
OrthoInspector 1 1.000 - - oto89320
orthoMCL 1 0.900 - - OOG6_104092
Panther 1 1.100 - - LDO PTHR21581
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4517
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.760

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