DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11396 and Trappc12

DIOPT Version :9

Sequence 1:NP_649255.1 Gene:CG11396 / 40296 FlyBaseID:FBgn0037022 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_006240026.1 Gene:Trappc12 / 314013 RGDID:1566054 Length:797 Species:Rattus norvegicus


Alignment Length:571 Identity:186/571 - (32%)
Similarity:278/571 - (48%) Gaps:109/571 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SEYFANDPP----------SFFDELASKPKGNNLSTEGSSSSASST----------SSAPNMMSN 50
            ||..|..||          :||.:..|   .|:|:::...|..:||          |..|..:::
  Rat   239 SETSAKTPPPMVQPSPSLSTFFGDTMS---SNSLASDFFDSFTTSTFISVSNPNAGSPVPEKLAS 300

  Fly    51 TF--VGFFQP----PEY---------------VETPEAGE-----DSIKVGDD-----VRNLWEL 84
            ..  ||...|    |.|               ::.||:.:     .::..|.|     ..::.|:
  Rat   301 LTAPVGEKSPDSTSPSYSTRMDRSESGVSRAALDVPESPKPFSQIQAVFAGSDDPFATALSMSEM 365

  Fly    85 PRENE---PGK-----------------------LIMPGIHLQTDLADPISVAVTQHLGEAELSY 123
            .|.|:   |.:                       |.|||:.......|.:...:.:.|||...:.
  Rat   366 DRRNDAWLPSQATREVLMSVATQQYGTVFIDKENLTMPGLKFDNIQGDAVKDLMLRFLGEKAAAK 430

  Fly   124 RKILRVDDVTQDERGLRTLIHAGCYRTAVNLTGRLLTIYGQGYGRSGQPAKHSPHSLQLWFTRLA 188
            |::|....|.|...||:.||....:|.||:|.|||||.:|||||:||.|..|:..||||||.|||
  Rat   431 RQVLNASSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLPTNHTTDSLQLWFVRLA 495

  Fly   189 LLAKLGEFELLNAEAEPFGQLTSPDVFYDFYPEMYNGKSGSIACFSFRLLLAELPIYLGKPHVAL 253
            ||.|||.|:....|.||||.|..||::|::||.:|.|:.||:..||.|:|.|||..|||.|..:|
  Rat   496 LLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESL 560

  Fly   254 DRLSELHVTTREI---------KEHYLSL----HNKAAEEFWQRRCERVLHSIINCGLMMKKFSM 305
            |||..:.....:|         ::..||.    ..:|:.:.|:.|..|||:|:.||.|:||.:.:
  Rat   561 DRLHRVKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVL 625

  Fly   306 -IDDIMEGTLLKRSNLSKEDRRSLYSAWGRIYLQIGDIFGAEQKI----AVSRRLREINSAPDLR 365
             ::..:  |::|   ...|....|.|..|||.||||||..||:..    .|:::|..:..  .:.
  Rat   626 AVNAYL--TVIK---YYPEQEPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQKLDGLQG--KIM 683

  Fly   366 DLVDKGLIAVAKNDFPEAYVIFQKALHLDTGNTMILNNMGVCLLYAGKLKDAINLYERAINLNPQ 430
            .|:::..:.:.:|:|.||:..|.:.|.:|..|.:..||..|||||.|||||::...|..:..:|:
  Rat   684 VLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYLGKLKDSLRQLEAMVQQDPR 748

  Fly   431 KSLNESLLVNLSTLYELESNNSKAKKYNLLRLINRYKPD-LNISIEICLKL 480
            ..|:||:|.||:|:|||||:.|..||.:||..:...:.| .|..   ||||
  Rat   749 HYLHESVLFNLTTMYELESSRSMQKKQSLLEAVASKEGDSFNTQ---CLKL 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11396NP_649255.1 TPR repeat 328..357 CDD:276809 15/32 (47%)
TPR_11 367..429 CDD:290150 22/61 (36%)
TPR repeat 367..392 CDD:276809 6/24 (25%)
TPR repeat 397..427 CDD:276809 14/29 (48%)
TPR_1 400..430 CDD:278916 13/29 (45%)
Trappc12XP_006240026.1 TPR_12 606..674 CDD:290160 26/72 (36%)
TPR repeat 608..635 CDD:276809 10/28 (36%)
TPR repeat 641..675 CDD:276809 14/33 (42%)
TPR_12 643..713 CDD:290160 22/71 (31%)
TPR repeat 680..710 CDD:276809 6/31 (19%)
TPR_11 684..747 CDD:290150 22/62 (35%)
TPR_2 684..714 CDD:285020 8/29 (28%)
TPR repeat 716..740 CDD:276809 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340582
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2796
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H34805
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142416at2759
OrthoFinder 1 1.000 - - FOG0006235
OrthoInspector 1 1.000 - - oto96444
orthoMCL 1 0.900 - - OOG6_104092
Panther 1 1.100 - - LDO PTHR21581
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4517
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.710

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