DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11396 and Trappc12

DIOPT Version :9

Sequence 1:NP_649255.1 Gene:CG11396 / 40296 FlyBaseID:FBgn0037022 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001363935.1 Gene:Trappc12 / 217449 MGIID:2445089 Length:798 Species:Mus musculus


Alignment Length:557 Identity:184/557 - (33%)
Similarity:274/557 - (49%) Gaps:90/557 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SHKISEYFANDPPS------FFDEL------------ASKPKGNNLST----EGSSSSASSTSSA 44
            |..:|.:|.:...|      |||..            |..|....||:    .|..|..|::.|.
Mouse   253 SPSLSTFFGDTMSSNSLASDFFDSFTTSTFISVSNPNAGSPVPEKLSSLTAPVGEKSPDSTSPSY 317

  Fly    45 PNMMSNTFVGFFQPPEYVETPEAGE-----DSIKVGDD-----VRNLWELPRENE---PGK---- 92
            ...|..:..|..:.|  ::.||:.:     .::..|.|     ..::.|:.|.|:   |.:    
Mouse   318 STRMDRSESGVSRAP--LDVPESPKPFSQIQAVFAGSDDPFATALSMSEMDRRNDAWLPSQATRE 380

  Fly    93 -------------------LIMPGIHLQTDLADPISVAVTQHLGEAELSYRKILRVDDVTQDERG 138
                               |.|||:.......|.:...:.:.|||...:.|::|....|.|...|
Mouse   381 VLMSVATQQYGTVFIDKENLTMPGLKFDNIQGDAVKDLMLRFLGEKAAAKRQVLNASSVEQSFVG 445

  Fly   139 LRTLIHAGCYRTAVNLTGRLLTIYGQGYGRSGQPAKHSPHSLQLWFTRLALLAKLGEFELLNAEA 203
            |:.||....:|.||:|.|||||.:|||||::|.|..|:..||||||.|||||.|||.|:....|.
Mouse   446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQNAEMEF 510

  Fly   204 EPFGQLTSPDVFYDFYPEMYNGKSGSIACFSFRLLLAELPIYLGKPHVALDRLSELHVTTREI-- 266
            ||||.|..||::|::||.:|.|:.||:..||.|:|.|||..|||.|..:||||..:.....:|  
Mouse   511 EPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHRVKTVCSKILA 575

  Fly   267 -------KEHYLSL----HNKAAEEFWQRRCERVLHSIINCGLMMKKFSM-IDDIMEGTLLKRSN 319
                   ::..||.    ..:|:.:.|:.|..|||:|:.||.|:||.:.: :|..:  |::|   
Mouse   576 NLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVLAVDAYL--TVIK--- 635

  Fly   320 LSKEDRRSLYSAWGRIYL-QIGDIFGAEQKI----AVSRRLREINSAPDLRDLVDKGLIAVAKND 379
            ...|....|.|..|||.| |||||..||:..    .|:::|..:..  .:..|:::..:.:.:|:
Mouse   636 YYPEQEPQLLSGIGRILLQQIGDIKTAEKYFQDVEKVTQKLDGLQG--KIMVLMNRAFLYLGQNN 698

  Fly   380 FPEAYVIFQKALHLDTGNTMILNNMGVCLLYAGKLKDAINLYERAINLNPQKSLNESLLVNLSTL 444
            |.||:..|.:.|.:|..|.:..||..|||||.|||||::...|..:..:|:..|:||:|.||:|:
Mouse   699 FAEAHKFFTEILRMDPTNAVANNNAAVCLLYLGKLKDSLRQLEAMVQQDPRHYLHESVLFNLTTM 763

  Fly   445 YELESNNSKAKKYNLLRLINRYKPD-LNISIEICLKL 480
            |||||:.|..||.:||..:...:.| .|..   ||||
Mouse   764 YELESSRSMQKKQSLLEAVASKEGDSFNTQ---CLKL 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11396NP_649255.1 TPR repeat 328..357 CDD:276809 15/33 (45%)
TPR_11 367..429 CDD:290150 22/61 (36%)
TPR repeat 367..392 CDD:276809 6/24 (25%)
TPR repeat 397..427 CDD:276809 14/29 (48%)
TPR_1 400..430 CDD:278916 13/29 (45%)
Trappc12NP_001363935.1 PHA03307 1..>380 CDD:223039 26/128 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..257 1/3 (33%)
GREB1 <214..>332 CDD:374106 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..338 12/53 (23%)
tol_pal_ybgF <600..671 CDD:188247 28/75 (37%)
TPR 1 607..640 12/37 (32%)
TPR repeat 608..635 CDD:276809 11/28 (39%)
TPR repeat 641..676 CDD:276809 14/34 (41%)
TPR_12 644..712 CDD:315987 22/69 (32%)
TPR repeat 681..711 CDD:276809 6/31 (19%)
TPR 3 683..716 8/32 (25%)
TPR 4 717..750 14/32 (44%)
TPR repeat 717..741 CDD:276809 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836867
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2796
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H34805
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006235
OrthoInspector 1 1.000 - - oto92890
orthoMCL 1 0.900 - - OOG6_104092
Panther 1 1.100 - - LDO PTHR21581
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4000
SonicParanoid 1 1.000 - - X4517
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.730

Return to query results.
Submit another query.