DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11399 and pcif1

DIOPT Version :9

Sequence 1:NP_649254.2 Gene:CG11399 / 40295 FlyBaseID:FBgn0037021 Length:920 Species:Drosophila melanogaster
Sequence 2:NP_001017341.1 Gene:pcif1 / 550095 XenbaseID:XB-GENE-971096 Length:693 Species:Xenopus tropicalis


Alignment Length:690 Identity:292/690 - (42%)
Similarity:411/690 - (59%) Gaps:85/690 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SPSTPTKTHAPSPLESMGHTPQGPPTLGPGGYGEELTAELVNQGWRKFWSKRENRPYYWNKVTGE 164
            ||.......:.||  |..|:|:.|..|      .:|..|||..||.|.|||||:||||:|:.|.:
 Frog     8 SPQEDAALISLSP--STSHSPRPPRAL------TDLPDELVQAGWEKCWSKRESRPYYFNRFTNQ 64

  Fly   165 SLWEMPGTRPFDPLTDPLGI------CHAGGPTPIIPNMHQQQQHQHHHLKRRPSDDMHIHPNQH 223
            ||||||.....|.::||||:      ....|..|..|...:.|       |||.|:|        
 Frog    65 SLWEMPVLGQHDVISDPLGLNAAPVQVEGAGAVPETPKDTKPQ-------KRRISED-------- 114

  Fly   224 HMGGGPPMKKF-----------VLAGP----------------------WDLEVCTNAVIVERPP 255
             :..|..:||.           |.:.|                      |||::.:|.|:...||
 Frog   115 -LSAGETVKKLKIESTPVTPGSVPSSPIFPGVSLDEKQLSALLKTTDVYWDLDIQSNVVVKPLPP 178

  Fly   256 T-LLP------QPHPEVEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRWLMERKVIDTGCDP 313
            : |||      .|:||||.||:...:||.:.|.:||.:||.|..||:||||||:||||:|.|.||
 Frog   179 SHLLPPPSQFLPPYPEVELLRSQLVLKLRQHYRELCQQREGIDPPRESFNRWLLERKVLDRGPDP 243

  Fly   314 LLPSSCMPEISSSMYREIMSDIPIKIVKPKFTGDARKQLSRYAEAAKQIIESRSAPAESKKVVKW 378
            ||||.|.|.:|.||:||||:|:||::.:.|...:|::.|.:||||||::||||||.::|:|:|||
 Frog   244 LLPSDCDPAVSPSMFREIMNDVPIRLSRIKHREEAKRLLFKYAEAAKRLIESRSASSDSRKMVKW 308

  Fly   379 NVEDTFQWLRRTVGASYEDFQDRLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERH 443
            ||||||.||||...|:.||:.|||.||::||.||:....|.|||.:|.||||:|.::.::|||:|
 Frog   309 NVEDTFSWLRRDHLATKEDYMDRLEHLRKQCGPHMAAVAKDSVEGICSKIYHISREYVKRIREKH 373

  Fly   444 SQLLKEHGIPEPTPPPPPPHLKKVWCYPIQFAVPS-PRMPTIEYLQDRDHMIIKYTPATINQPDA 507
            ..||::..||....|...|..::|:|:|::.:||: |..|.:|..|:...:.::|...::.    
 Frog   374 LALLRDANIPVDQVPAVSPQDRRVFCHPVRLSVPALPTQPGVEVQQEGSLVCVRYKGESVR---- 434

  Fly   508 QYINLTYLQKLEQLYRHNCFDDKKFDLFIGRVWCLLKRYQTFLGNALNSSQEAELTQAALPVPVF 572
              ||.:|..||.||||.:|.||...:.|:.||||||:|||...|.|   ..|....|.||||.||
 Frog   435 --INQSYFSKLYQLYRLSCIDDSGTERFLSRVWCLLRRYQVMFGTA---QYEGSGLQGALPVHVF 494

  Fly   573 ECLHRQFGVSFECFASPFNSYFRQYCSAFADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEA 637
            :.||:.|||:.||||||.|.||:||||||.|||.|||||||.|.|.||||||:.|||..|||::|
 Frog   495 QTLHKVFGVTLECFASPLNCYFKQYCSAFTDTDGYFGSRGPCLSFFPVSGSFEANPPFSEELMDA 559

  Fly   638 SLLHIDKLLTDTMEPLSFIVFLPEWK-----SISKLDDSMYKRRSMVVLGMAHEYRHGYQHMLQK 697
            .:.|.:.||..:.:|||||:|:|||:     ::::::.|.:||..:::....||||.|.|||.::
 Frog   560 MVTHFENLLESSDQPLSFIIFIPEWRDPPTPALTRMESSRFKRHQLLLTAFQHEYRSGSQHMCKR 624

  Fly   698 SDVLIKCMQGTQVVWLQNSAGYARWGPNEIRVEALREAFR 737
            .::..|.:..|.|::|||..|:.:|.|...|::.|..:::
 Frog   625 EELYYKAVHNTAVIFLQNEPGFLKWTPTAERIQELTASYK 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11399NP_649254.2 WW 143..170 CDD:238122 18/26 (69%)
PCIF1_WW 524..685 CDD:289041 83/165 (50%)
pcif1NP_001017341.1 WW 42..72 CDD:238122 20/29 (69%)
PTZ00009 <273..353 CDD:240227 45/79 (57%)
PCIF1_WW 442..612 CDD:371982 89/172 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 271 1.000 Domainoid score I1787
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11134
Inparanoid 1 1.050 552 1.000 Inparanoid score I1109
OMA 1 1.010 - - QHG52676
OrthoDB 1 1.010 - - D114954at33208
OrthoFinder 1 1.000 - - FOG0007279
OrthoInspector 1 1.000 - - oto103388
Panther 1 1.100 - - LDO PTHR21727
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5561
SonicParanoid 1 1.000 - - X5383
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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