DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11399 and Pcif1

DIOPT Version :9

Sequence 1:NP_649254.2 Gene:CG11399 / 40295 FlyBaseID:FBgn0037021 Length:920 Species:Drosophila melanogaster
Sequence 2:XP_038961470.1 Gene:Pcif1 / 362269 RGDID:1310800 Length:721 Species:Rattus norvegicus


Alignment Length:709 Identity:312/709 - (44%)
Similarity:439/709 - (61%) Gaps:56/709 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SPSTPTKTHAPSPLESMGHTPQGPPTLGPGGYGEELTAELVNQGWRKFWSKRENRPYYWNKVTGE 164
            ||.......:.||..|..:.|..|.   |....::|..|||:.||.|.||:||:||||:|:.|.:
  Rat    25 SPREEASLLSHSPGTSNQNQPCSPK---PVRLVQDLPEELVHAGWEKCWSRRESRPYYFNRFTNQ 86

  Fly   165 SLWEMPGTRPFDPLTDPLGICHAGGP-------TPIIPNMHQQQQHQHHHLK----RRPSDDMHI 218
            ||||||.....|.|:||||:.....|       ||.:.|..:::|.......    ::|..::.:
  Rat    87 SLWEMPVLGQHDVLSDPLGLNATPLPQDSTLVETPPVENKPRKRQLSEEQPSGNGVKKPKIEIPV 151

  Fly   219 HPNQHHMGGGPPM---------------KKFVLAGP----WDLEVCTNAVIVERPPTLLPQPHPE 264
            .|....:...|.:               |:..|..|    |||::.|||||..|.|:.:..||||
  Rat   152 TPTSQSVPSSPSIPGTPILKIWGASTEDKQAALLRPTEVYWDLDIQTNAVIKHRGPSEVLPPHPE 216

  Fly   265 VEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRWLMERKVIDTGCDPLLPSSCMPEISSSMYR 329
            ||.||:...:||.:.|.:||.:||.|:.||:|||||::||||:|.||||||||:|.|.:|.||:|
  Rat   217 VELLRSQLILKLRQHYRELCQQREGIEPPRESFNRWMLERKVVDKGCDPLLPSNCEPVVSPSMFR 281

  Fly   330 EIMSDIPIKIVKPKFTGDARKQLSRYAEAAKQIIESRSAPAESKKVVKWNVEDTFQWLRRTVGAS 394
            |||:||||::.:.||..:|::.|.:|||||:::||||||..:|:|||||||||||.|||:...||
  Rat   282 EIMNDIPIRLSRIKFREEAKRLLFKYAEAARRLIESRSASPDSRKVVKWNVEDTFSWLRKEHSAS 346

  Fly   395 YEDFQDRLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERHSQLLKEHGIPEPTPPP 459
            .||:.|||.||:|||.||:....|.|||.:|.||||:|.::.::|||:|..:|||:.|||.....
  Rat   347 KEDYMDRLEHLRRQCGPHVSAAAKDSVEGICSKIYHISLEYVKRIREKHLAILKENNIPEEVEAS 411

  Fly   460 P-PPHLKKVWCYPIQFAVPSPRMPTIEYLQDRDHMIIKYTPATINQPDAQYINLTYLQKLEQLYR 523
            . .|.|  |:|||::.||.:|.||::|...:...:.|:|....:.      ::.:|..||..|||
  Rat   412 ELEPRL--VYCYPVRLAVSAPPMPSVEMHMENSVVCIRYKGEMVK------VSRSYFSKLWLLYR 468

  Fly   524 HNCFDDKKFDLFIGRVWCLLKRYQTFLGNALNSSQEAELTQAALPVPVFECLHRQFGVSFECFAS 588
            ::|.||..|:.|:.||||||:|||...|..|   .|....|.:|||.|||.|||.||||||||||
  Rat   469 YSCVDDSAFERFLPRVWCLLRRYQMMFGVGL---YEGTGLQGSLPVHVFEALHRLFGVSFECFAS 530

  Fly   589 PFNSYFRQYCSAFADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEASLLHIDKLLTDTMEPL 653
            |.|.|||||||||.|||.|||||||.|||.|:||||:.|||.||||::|.:.|.:|||..:.|||
  Rat   531 PLNCYFRQYCSAFPDTDGYFGSRGPCLDFTPLSGSFEANPPFCEELMDAMVSHFEKLLESSPEPL 595

  Fly   654 SFIVFLPEWK-----SISKLDDSMYKRRSMVVLGMAHEYRHGYQHMLQKSDVLIKCMQGTQVVWL 713
            |||||:|||:     ::::::.|.:||..:|:....||||.|.||:.:|.::..|.:..|.|::|
  Rat   596 SFIVFIPEWREPPTPALTRMEQSRFKRHQLVLSAFEHEYRSGSQHICKKEEMHYKAVHNTAVLFL 660

  Fly   714 QNSAGYARWGPNEIRVEALREAFRPQRDRERERAAAAAAAAGV-----TSSQQSPSTPP 767
            ||..|:|:|||...|::.|..|:: |..|....::::::::..     :..:|.||..|
  Rat   661 QNDPGFAKWGPTPERLQELTAAYK-QSGRSHGSSSSSSSSSSEAKDRDSGREQGPSREP 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11399NP_649254.2 WW 143..170 CDD:238122 17/26 (65%)
PCIF1_WW 524..685 CDD:289041 93/165 (56%)
Pcif1XP_038961470.1 WW 64..94 CDD:238122 19/29 (66%)
PCIF1_WW 462..632 CDD:403450 98/172 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338555
Domainoid 1 1.000 293 1.000 Domainoid score I1454
eggNOG 1 0.900 - - E1_28P6D
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11134
Inparanoid 1 1.050 593 1.000 Inparanoid score I935
OMA 1 1.010 - - QHG52676
OrthoDB 1 1.010 - - D114954at33208
OrthoFinder 1 1.000 - - FOG0007279
OrthoInspector 1 1.000 - - oto96686
orthoMCL 1 0.900 - - OOG6_106120
Panther 1 1.100 - - LDO PTHR21727
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5383
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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