DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcif1 and Pcif1

DIOPT Version :10

Sequence 1:NP_649254.2 Gene:Pcif1 / 40295 FlyBaseID:FBgn0037021 Length:920 Species:Drosophila melanogaster
Sequence 2:XP_061509046.1 Gene:Pcif1 / 1280736 VectorBaseID:AGAMI1_012817 Length:794 Species:Anopheles gambiae


Alignment Length:838 Identity:471/838 - (56%)
Similarity:557/838 - (66%) Gaps:116/838 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AAQSAWDQLTASASNN----------------------MSPSPTAGAP-TVTGPILPDNLGVGAG 91
            ||.|||||||..:...                      .||...|.:| |::.|:|         
Mosquito    16 AAPSAWDQLTNPSLAEQQHPQHQQQQVPPLHQHQHHPAQSPQMQASSPTTISAPLL--------- 71

  Fly    92 SSPVASCSSPSTPTKTHAPSPLESMGHTPQGPPTLGPG-GYGEELTAELVNQGWRKFWSKRENRP 155
                       |||||..|    .:.|||.|.....|| .:.|||..||..|||||||||||.||
Mosquito    72 -----------TPTKTTPP----DVAHTPSGAAPGAPGANFNEELAPELTQQGWRKFWSKREGRP 121

  Fly   156 YYWNKVTGESLWEMP----GTRPFDPLTDPLGICHA---GGPTPI------IPNMHQQQQHQHHH 207
            |:|||:|||||||.|    |...|||||||||||..   .||.|:      ..|.|....:.||.
Mosquito   122 YFWNKLTGESLWEPPQLNRGPPQFDPLTDPLGICSTSPLNGPLPMHNSTGYNNNSHPSPHNHHHT 186

  Fly   208 LKRRPSDD-------------MHIHPNQHHMGGGPPMKKFVLAGPWDLEVCTNAVIVERPPTLLP 259
            ||||.|:|             .|:.|....:||.||:||:||.|||||||.||.:|.||.||..|
Mosquito   187 LKRRASEDAAQQQPQQQQHHSAHLPPGAGSVGGPPPLKKYVLPGPWDLEVPTNVLIYERLPTTFP 251

  Fly   260 QPHPEVEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRWLMERKVIDTGCDPLLPSSCMPEIS 324
            ||:|||||||.:.|::|.|||||||.:||:|..|:|||.||||||::||.|.||||||.|.||||
Mosquito   252 QPYPEVEALRGSLTLRLAKTYEDLCNKRESIAPPKDSFQRWLMERRIIDQGIDPLLPSQCTPEIS 316

  Fly   325 SSMYREIMSDIPIKIVKPKFTGDARKQLSRYAEAAKQIIESRSAPAESKKVVKWNVEDTFQWLRR 389
            ..|||||:.||||||||||||||||||||||.:|||:|:|.|.|..||||:||||.::.::||||
Mosquito   317 PQMYREILRDIPIKIVKPKFTGDARKQLSRYCDAAKKIVERRGASEESKKIVKWNADEAYEWLRR 381

  Fly   390 TVGASYEDFQDRLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERHSQLLKEHGIPE 454
            |||||||||||||.||:||||||::.||:.|||.||.|:||||..|||.|||||:|:||||||||
Mosquito   382 TVGASYEDFQDRLTHLQRQCEPHIIATVRVSVEQLCAKLYHLSMQHARNIRERHAQILKEHGIPE 446

  Fly   455 PTPPPPPPHLKKVWCYPIQFAVPSPRMPTIEYLQDRDHMIIKYT-PATINQPDAQYINLTYLQKL 518
            .:.|..||..:||||||:|||:||||||.|:|..|||||:|||| .|.:..||...:|:::||||
Mosquito   447 LSAPLQPPVTRKVWCYPVQFALPSPRMPQIDYSNDRDHMVIKYTNTAVMAAPDTHVVNISHLQKL 511

  Fly   519 EQLYRHNCFDDKKFDLFIGRVWCLLKRYQTFLGNALN-SSQEAELTQAALPVPVFECLHRQFGVS 582
            |||||:|||||||||.||||.:|:||||.|||||..| :.||.||||||||..||||||..|.|:
Mosquito   512 EQLYRYNCFDDKKFDFFIGRAYCMLKRYATFLGNNANPNQQEPELTQAALPAVVFECLHHHFNVT 576

  Fly   583 FECFASPFNSYFRQYCSAFADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEASLLHIDKLLT 647
            |||||||.|.|||||||||.|||::|||||.||||||||||||||||:|||||:|||.|||:|||
Mosquito   577 FECFASPLNCYFRQYCSAFGDTDSFFGSRGSFLDFKPVSGSFQVNPPYCEELIDASLQHIDRLLT 641

  Fly   648 DTMEPLSFIVFLPEWKS-----ISKLDDSMYKRRSMVVLGMAHEYRHGYQHMLQKSDVLIKCMQG 707
            |::|||||||||.|||.     :||::||.|||:.:||:||.||||||.||.:.||:|..|.:.|
Mosquito   642 DSVEPLSFIVFLQEWKDPPLKCLSKIEDSPYKRKQVVVMGMEHEYRHGLQHCIPKSEVNFKSIVG 706

  Fly   708 TQVVWLQNSAGYARWGPNEIRVEALREAFRPQRDRERERAAAAAAAAGVTSSQQSPSTPPSAAST 772
            |.||||||:||||||.|.|.||:||.|||||.|:|:|::|.                    |.||
Mosquito   707 TMVVWLQNAAGYARWAPTEARVDALLEAFRPGRERDRDKAI--------------------ATST 751

  Fly   773 APTTNSCTISGVNSNSSSTATTTSTSSSPSLTTTSSSMSPLSPHTPTGNPPPQFPMTI 830
            .|...||               ::|:|||...|..:|.|.....:.||...|..|.|:
Mosquito   752 VPVQASC---------------SATASSPEPGTAGNSGSGAGDLSSTGPSKPSTPATV 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcif1NP_649254.2 WW 143..170 CDD:459800 23/26 (88%)
PCIF1_WW 517..685 CDD:463502 128/173 (74%)
Pcif1XP_061509046.1 None

Return to query results.
Submit another query.