DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pitslre and AT5G44290

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001032009.1 Gene:AT5G44290 / 834452 AraportID:AT5G44290 Length:644 Species:Arabidopsis thaliana


Alignment Length:543 Identity:166/543 - (30%)
Similarity:241/543 - (44%) Gaps:119/543 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 KSPKQ--------RQRSRSVSSKSSSQSSRSSRSRSRSRSQSSLEDEVDRQDVGADASPSSSTRS 504
            ||||:        .:||..::|.....||::...:.||.....:|.|          ..|||..|
plant     9 KSPKRNPPWKETLEKRSSRINSSRIDDSSQTKEEQDRSNKVRLIESE----------KFSSSRFS 63

  Fly   505 E------ERGMTQEQPEE--KPEEKLK--------------EKQKSLEEQIPC---DDKGIPLPN 544
            |      |.|.|.|..::  .|.|:||              .|:..|....|.   ...|..|.|
plant    64 EKHQEIAEIGDTDEDEDDDHHPPEELKREPSVVIPPSPETVSKEAELAAGWPAWLVSVAGEALVN 128

  Fly   545 YYPGVQGCRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSL------ 603
            :.|     |....|:.|.:|.:|||..||:|:|...|:||||||::       |.::.|      
plant   129 WTP-----RRASTFEKLEKIGQGTYSSVYKARDLTNNKIVALKRVR-------FDLSDLESVKFM 181

  Fly   604 -REINTLLKGQHPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPG------E 661
             |||..:.:..|||::.:..::..|....:::|.:|::|||..|         :..||      :
plant   182 AREIIVMRRLDHPNVLKLEGLITASVSSSLYLVFEYMDHDLVGL---------ASIPGIKFSEPQ 237

  Fly   662 VKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREYGS----PIKKYTSLVV 722
            |||..||||..:.|.|...:||||:|.||||:...|:||:.|||||..:..    |:   ||.||
plant   238 VKCYMQQLLSGLHHCHSRGVLHRDIKGSNLLIDSNGVLKIADFGLATFFDPQNCVPL---TSRVV 299

  Fly   723 TLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIW-- 785
            |||||.|||||.:..|...:|:||.|||..|.....|:..||:|:::|::|||..|:|.|..|  
plant   300 TLWYRPPELLLGACHYGVGVDLWSTGCILGELYSGKPILAGKTEVEQLHKIFKLCGSPTEDYWRK 364

  Fly   786 ----PGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAAL 846
                |.....||:.........|.:.|.:.             ||||:.||:.||.:|.||..||
plant   365 LKLPPSAAFRPALPYGRRVAEMFKDLPTNV-------------LSLLEALLSIDPDRRGSAARAL 416

  Fly   847 KHGFFKELPLPIDPSMFPTWPAKSELGAR---KAQASSPKPPSGGSQFKQLGRDE-----PIIVG 903
            :..:|:..|...|||..|.:|...|:.|:   .|:...|.......|..|..|..     |.:..
plant   417 ESEYFRTEPFACDPSSLPKYPPSKEIDAKIRDDAKRQRPTQEKHERQDSQTRRSHERKLIPPVKA 481

  Fly   904 PGNKLSSGI--------ITGNKK 918
            ....||:.:        :.||.:
plant   482 NNPSLSTAVENPYLRSCVPGNSQ 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 114/321 (36%)
PLN00009 555..854 CDD:177649 114/321 (36%)
AT5G44290NP_001032009.1 STKc_CDK9_like 137..421 CDD:270832 113/315 (36%)
S_TKc 137..421 CDD:214567 113/315 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I1211
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.970

Return to query results.
Submit another query.