DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pitslre and AT3G01085

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001325617.1 Gene:AT3G01085 / 821283 AraportID:AT3G01085 Length:631 Species:Arabidopsis thaliana


Alignment Length:492 Identity:157/492 - (31%)
Similarity:243/492 - (49%) Gaps:88/492 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 KSQLEDDDEDLPLPDSPLSVGELYKSPKQRQRS--RSVSSKSSSQSSRSSRSRSRSRSQSSLEDE 486
            :|..:|......||..|.....:..|||:.:.:  .:..|:::..|.||....|..        |
plant    28 RSHTQDPHNRHVLPGPPSHRRVVNSSPKKHRNNDDDAPKSRTTGVSLRSGLPHSNV--------E 84

  Fly   487 VDRQDVGADASPSSSTRSEERGMTQEQPEEKPEEKLKEKQKSLEEQIPCDDKGIPLPNYYPGVQG 551
            .::...|..:..||:......|.                              :||         
plant    85 AEQVAAGWPSWLSSAAPEAVHGW------------------------------VPL--------- 110

  Fly   552 CRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEK-EKEGFPITSLREINTLLKGQHP 615
              ..|:|:...:|.:|||..|:||.:..|..::|||:::::. |.|.....: |||..|.:..||
plant   111 --RAEDFEKREKIGQGTYSNVFRACEVSTGRVMALKKIRIQNFETENIRFIA-REIMILRRLDHP 172

  Fly   616 NIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNW 680
            ||:.:..|:...|.:.::.|.||:||||:.|..:...:   |...::||..:|||..|.|.|...
plant   173 NIMKLEGIIASRNSNSMYFVFDYMEHDLEGLCSSPDIK---FTEAQIKCYMKQLLWGVEHCHLRG 234

  Fly   681 ILHRDLKTSNLLLSHKGILKVGDFGLAREYGSPIKK--YTSLVVTLWYRAPELLLCSPVYSTPID 743
            |:|||:|.:|:|:::||:||:.||||| ...:|..|  .||.||||||||||||:.|..||..:|
plant   235 IMHRDIKAANILVNNKGVLKLADFGLA-NIVTPRNKNQLTSRVVTLWYRAPELLMGSTSYSVSVD 298

  Fly   744 VWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNML-SQNSQFTEY 807
            :|||||:|||.|...||..|::||::|::|:|..|:|:|:.|.        ||.| .|...|.  
plant   299 LWSVGCVFAEILTGRPLLKGRTEIEQLHKIYKLSGSPDEEFWE--------KNKLHPQTKMFR-- 353

  Fly   808 PVSQ----LRKHFQE--KTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKELPLPIDPSMFPTW 866
            |..|    ||:.|.|  ||:   ::||:.||:.||::|.:|.:||...:|...|...|||..|.:
plant   354 PQHQYEGCLRERFDEFPKTA---INLLENLLSIDPEKRGTASSALMSEYFNTQPYACDPSTLPKY 415

  Fly   867 PAKSELGA-------RKAQASSPKPPSGGSQFKQLGR 896
            |...|:.|       |:.:.|..|..:..:  |:||:
plant   416 PPNKEMDAKYREELQRRRRVSIKKRDNLAT--KKLGK 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 122/308 (40%)
PLN00009 555..854 CDD:177649 123/308 (40%)
AT3G01085NP_001325617.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.