DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and Cdk12

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001262167.1 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster


Alignment Length:965 Identity:252/965 - (26%)
Similarity:406/965 - (42%) Gaps:187/965 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PPQASRESGSGPRREKKKHSRERRRHKERDDVGGAALALERD----------HRYDYRS--REEH 92
            ||.:||.||:|||......:.....:......|..:.::.||          |:.|..:  |..|
  Fly   264 PPPSSRSSGNGPRFGNSPRTPPPSHYSSSGGGGVGSGSVVRDSRSSRYVNSPHKEDVSAHHRSSH 328

  Fly    93 YHHHQRERSSNAAAAY-------AKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGA 150
            .|.:|...|...::::       ....|....|.|..|..:::...........::.|.:|    
  Fly   329 DHGYQGRYSGAGSSSHDTRKVKRLSPELDRYNHQPSTPPHKRRKFSDGREVGLGNFEHSRH---- 389

  Fly   151 RAAPREYHSYPSGYHSGSRHGDYPMEEPTRRSSK---YAESKDAESLEQDLRSRLLKKRH--NYV 210
                          ||| ::..|..:..:||||:   ...|:..:|....|.|.....||  ::.
  Fly   390 --------------HSG-KYERYSRDRYSRRSSRSPSVQHSRSRQSPSGGLSSGSNAFRHGGSHK 439

  Fly   211 KDYET--EENYEHRVERSDRREGGRKERERTVRSTHKQNRHDRVIELLDSPEQE-----HHHQHQ 268
            ..|.|  .....|....|.|..|.....:|..||....:|:     :..||...     .||.|.
  Fly   440 HKYGTTVSSTPSHTTRTSKRASGTGTSGDRYSRSPRTSSRY-----MESSPPSPVGASGSHHYHH 499

  Fly   269 HKSHRSKWREEVEVIRRKVPEDLELLARREKLLAAERESRQRKQTAREELEARRELLRERNEHSD 333
            .:|.|.:.|...: .||:.|....         :....||.|..|:       |:|..:|.|:..
  Fly   500 RRSPRMRQRTRGD-SRRRSPSSAS---------SESSASRSRSPTS-------RDLKHKREEYIK 547

  Fly   334 ALSPTTVAASVTAGLNIHVKRKSKPDNYEKEIKLKKRREDDIE----VIRDDDDEESEESDSNEE 394
            .:|.|::.|.:       ||.:.|.....||| ::::.|:...    .:..:|:..|.:.::...
  Fly   548 KISETSLFAEL-------VKDRHKRQKALKEI-IERQEENSNSNSNGALTINDNSSSVDGNTPNA 604

  Fly   395 VPEQDSEGSATESGSEDSYASKKKSKIKSKSQLEDDDEDLPLPD--------SPLSVGELYKSPK 451
            ...:.:.||.|.:.:  |..|.....:.||..|  |..::|:|:        :|.|..::..|..
  Fly   605 ADGRSAPGSGTPAAA--STTSNGLQALGSKPDL--DLNNIPMPNKQNDSVVSNPASNADVPDSVA 665

  Fly   452 QRQRSRSVSSKSSSQSSRSSRSRSRSRSQSSLEDEVDRQDVGADASPSSSTRSEERGMTQEQPEE 516
            |.::...|...|:|:::    .:.:|.:...|...::..|:....|||...:.|.        :|
  Fly   666 QLKQPLLVPPFSASKNN----IKPKSLTSLPLPPGMNVLDLAGARSPSPGQKKES--------DE 718

  Fly   517 KPEEKLKEKQKSL-----------EEQIPCDDKGIPLPNYY--------------PGVQ------ 550
            |.........||:           .|::..||..|..|..:              ||..      
  Fly   719 KNVTSSGSANKSVLNLPMPPVIPGSEELSGDDDVIDSPEDFDAPAVGTVHGHGGGPGTTRQRPVI 783

  Fly   551 -------------GCRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITS 602
                         |.|.|:.|:.:.:|.|||||.||:|:|..||::||||::::|.||||||||:
  Fly   784 LNRRDSRNNVRDWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITA 848

  Fly   603 LREINTLLKGQHPNIVTVREIV------VGSNMDK--IFIVMDYVEHDLKSLMETMKNRKQSFFP 659
            :|||..|.:..|.|||.:.|||      |....||  .::|.:|::|||..|:|   :....|..
  Fly   849 VREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLE---SGMVDFNE 910

  Fly   660 GEVKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREYGSPIKK--YTSLVV 722
            .....:.:|||..:.:.|....||||:|.||:|::::|.:|:.||||||.|.:..::  ||:.|:
  Fly   911 ENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLYNADDRERPYTNKVI 975

  Fly   723 TLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPG 787
            |||||.|||||....|...|||||.|||..|.....|||...:|:.:|..|.|..|:|...:||.
  Fly   976 TLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEMAQLETISKICGSPVPAVWPN 1040

  Fly   788 YTELPAVKNMLSQNSQFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFK 852
            ..:||....:..:.:.     ..:||:.| |......|.||..:|..||.:|::|:.||:..:.:
  Fly  1041 VIKLPLFHTLKQKKTH-----RRRLREDF-EFMPAPALDLLDKMLDLDPDKRITAEDALRSPWLR 1099

  Fly   853 -----ELPLPIDPSMFPTWPAKSELGARK-------AQASSPKPPSGGSQFKQLG 895
                 |:|.|    ..|||....||.::|       .|.|.|......::::|.|
  Fly  1100 KINPDEMPTP----QLPTWQDCHELWSKKRRRQMREQQESLPPTVIASTKYQQHG 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 121/308 (39%)
PLN00009 555..854 CDD:177649 120/313 (38%)
Cdk12NP_001262167.1 STKc_CDK12 796..1098 CDD:270847 122/310 (39%)
S_TKc 804..1098 CDD:214567 119/302 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442404
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 56 1.000 Inparanoid score I1799
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.000

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