DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and prpf4ba

DIOPT Version :10

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_017207374.1 Gene:prpf4ba / 393182 ZFINID:ZDB-GENE-040426-947 Length:986 Species:Danio rerio


Alignment Length:1050 Identity:217/1050 - (20%)
Similarity:358/1050 - (34%) Gaps:365/1050 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RREKKKHSRERRRHK-----ERDDVGGAALALERDHRYDYRSREEHYHHHQRERSSNAAAAYAKH 111
            ::.|.||..:.::||     |||          :.|:|.::.:.:|....:.:|..:.       
Zfish    52 KKRKHKHRSKHKKHKHSSPDERD----------QKHKYKHKHKRKHRDSFRDDRECST------- 99

  Fly   112 HLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGARAAPREYH------------------ 158
                                   ||           .||..:|:.:.                  
Zfish   100 -----------------------SY-----------EGAADSPKRFRLDDLAALEDLEKQRAMIQ 130

  Fly   159 ----------SYPS-------GYHSGSRHGDYPMEEPTRRSSKYAESKDAESLEQDLRSRLLKKR 206
                      |..|       ||:|.|..|:  ::|..|...:  :.||.:.| ..::....|.:
Zfish   131 AELDNELMEGSVQSGMGLILQGYNSDSEDGE--VQEAVRNGEQ--QRKDLDEL-VTVKGNGRKLQ 190

  Fly   207 HNYVKDYETEENYEHRVERSDRREGGRKERERTVRSTHKQNRHD-------RVIELLDSPEQEHH 264
            .:||.|   |:.|       ...||.....|.||:| ||..:.:       ::.|....|.:...
Zfish   191 QDYVND---EQFY-------SVLEGRTMSEEVTVQS-HKSEKRESMTGLGIKISERPSGPSETKE 244

  Fly   265 HQHQHKSHRSK---WREEVEVIRRKVPEDLELLARR------EKLLAAERESRQRKQTAREELEA 320
            .:....:.|||   .|.:..|..::||.......|:      |:.:.....||..|..::|...:
Zfish   245 RRRSRSTDRSKDRSRRSKSPVKSKEVPSSSATSNRKSNTRPEEQAVDHRSSSRSSKSGSKERSTS 309

  Fly   321 RRELLRERNEHSDALSPTTVAASVTAGL-NIHVKRKSKPDNYEKEIKLKKRREDD-IEVIRDDDD 383
            ..|:.|::......|.      .|::|. |....||..||.....::.:..|..: :.|:::.|.
Zfish   310 LPEVDRDKKPVKAPLK------EVSSGKENRSPSRKQGPDRLSPTVQPRSHRSPERLPVVQNTDR 368

  Fly   384 EESEESDS--NEEVPEQDSEGSATESGSEDSYASKKKSKIKSKSQLEDDDEDLP-------LPDS 439
            ...::..:  |...|.:....|......|:........:::|:.......||.|       |..|
Zfish   369 ASRQDRSTCHNRSPPRRGRSRSVERRRREEERQRLSSDRMRSRDMAGAHREDSPSISSRRRLNHS 433

  Fly   440 PLSVGELYKSPKQRQRSRSVSSKSS-------------------SQSSRSSRSRSRSR------- 478
            ||           |:||||...:||                   |:|....|.||:.|       
Zfish   434 PL-----------RRRSRSPRRRSSRSPLRHRERDRMDRRQPVRSRSQERRRRRSKEREDMFKGS 487

  Fly   479 ------------SQSSLED-EVDRQD---------------------VGADA---------SPSS 500
                        .:..||| :||.:|                     |..|:         ||.|
Zfish   488 LSEGMKAEQEDSDEEVLEDYDVDEEDEEALIEQRRLQRLAIMQKYKPVNEDSNMSGLSDHGSPQS 552

  Fly   501 STRSE--------ERGMTQEQPEEKP-----EEKLKEKQKSL-EEQIPCDDKGIPLPNYY----- 546
            ||.|.        ||.....:..|:.     |:.:|.|...: :|:...:.|..|.|:.:     
Zfish   553 STHSRSPSPDDILERVAADVKAYEQENLDTFEDNVKAKYSLVSQEKNGANSKKPPAPDMFTESDD 617

  Fly   547 -----------------------PGV-------QGCRSVEEFQCLNR-------IEEGTYGVVYR 574
                                   |.:       :|...|...:.|::       ..:|.:..|.|
Zfish   618 MFAAYFDSARLRAAGIGKDFKENPSLRDNWTDAEGYYRVNIGEVLDKRYAVYGYTGQGVFSNVIR 682

  Fly   575 AKD-KRTNEIVALKRLK----MEKEKEGFPITSLREINTLLK---------------------GQ 613
            |:| .|.|:.||:|.::    |:|       |.|:|:..|.|                     .|
Zfish   683 ARDLARANQEVAVKIIRNNEMMQK-------TGLKELEFLKKLNDADADDKFHCLRLFRHFYHKQ 740

  Fly   614 HPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPG----EVKCLTQQLLRAVA 674
            |                 :.:|.:.:..:|:.::     ||.....|    .|:..:|||..|:.
Zfish   741 H-----------------LCLVFEPLSMNLREVL-----RKYGKDVGLHIKAVRSYSQQLFLALK 783

  Fly   675 HLHDNWILHRDLKTSNLLLSH-KGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVY 738
            ||....|||.|:|..|:|::. |.|||:.|||.|.....  ...|..:|:.:|||||::: ...|
Zfish   784 HLKRCNILHADIKPDNILVNEPKTILKLCDFGSASHVAD--NDITPYLVSRFYRAPEIII-GKSY 845

  Fly   739 STPIDVWSVGCIFAEFLQMLPLFPGK--SEIDELNRIFKELGTPNEKIWPG-------------- 787
            ...||:|||||...|......|||||  :.:.:||...|. ..||:.|..|              
Zfish   846 DYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLNMDLKG-KLPNKMIRKGLFKDQHFDQNLNFL 909

  Fly   788 YTELPAVKNMLSQNSQFTEYPVSQLRKHF-------QEKTSEMG--LSLLQGLLTYDPKQRLSAD 843
            |||:..|..........|..|...|....       :::..::|  ..||..:|..||.:|::.:
Zfish   910 YTEVDKVTEREKITVMSTINPTKDLSMDMVGRQALPEDQRKKVGQLKDLLDQILMLDPAKRITIN 974

  Fly   844 AALKHGFFKE 853
            .||:|.|.:|
Zfish   975 QALQHPFIQE 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 93/361 (26%)
prpf4baXP_017207374.1 STKc_PRP4 665..982 CDD:271037 91/349 (26%)

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