DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and prpf4ba

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_017207374.1 Gene:prpf4ba / 393182 ZFINID:ZDB-GENE-040426-947 Length:986 Species:Danio rerio


Alignment Length:1050 Identity:217/1050 - (20%)
Similarity:358/1050 - (34%) Gaps:365/1050 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RREKKKHSRERRRHK-----ERDDVGGAALALERDHRYDYRSREEHYHHHQRERSSNAAAAYAKH 111
            ::.|.||..:.::||     |||          :.|:|.::.:.:|....:.:|..:.       
Zfish    52 KKRKHKHRSKHKKHKHSSPDERD----------QKHKYKHKHKRKHRDSFRDDRECST------- 99

  Fly   112 HLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGARAAPREYH------------------ 158
                                   ||           .||..:|:.:.                  
Zfish   100 -----------------------SY-----------EGAADSPKRFRLDDLAALEDLEKQRAMIQ 130

  Fly   159 ----------SYPS-------GYHSGSRHGDYPMEEPTRRSSKYAESKDAESLEQDLRSRLLKKR 206
                      |..|       ||:|.|..|:  ::|..|...:  :.||.:.| ..::....|.:
Zfish   131 AELDNELMEGSVQSGMGLILQGYNSDSEDGE--VQEAVRNGEQ--QRKDLDEL-VTVKGNGRKLQ 190

  Fly   207 HNYVKDYETEENYEHRVERSDRREGGRKERERTVRSTHKQNRHD-------RVIELLDSPEQEHH 264
            .:||.|   |:.|       ...||.....|.||:| ||..:.:       ::.|....|.:...
Zfish   191 QDYVND---EQFY-------SVLEGRTMSEEVTVQS-HKSEKRESMTGLGIKISERPSGPSETKE 244

  Fly   265 HQHQHKSHRSK---WREEVEVIRRKVPEDLELLARR------EKLLAAERESRQRKQTAREELEA 320
            .:....:.|||   .|.:..|..::||.......|:      |:.:.....||..|..::|...:
Zfish   245 RRRSRSTDRSKDRSRRSKSPVKSKEVPSSSATSNRKSNTRPEEQAVDHRSSSRSSKSGSKERSTS 309

  Fly   321 RRELLRERNEHSDALSPTTVAASVTAGL-NIHVKRKSKPDNYEKEIKLKKRREDD-IEVIRDDDD 383
            ..|:.|::......|.      .|::|. |....||..||.....::.:..|..: :.|:::.|.
Zfish   310 LPEVDRDKKPVKAPLK------EVSSGKENRSPSRKQGPDRLSPTVQPRSHRSPERLPVVQNTDR 368

  Fly   384 EESEESDS--NEEVPEQDSEGSATESGSEDSYASKKKSKIKSKSQLEDDDEDLP-------LPDS 439
            ...::..:  |...|.:....|......|:........:::|:.......||.|       |..|
Zfish   369 ASRQDRSTCHNRSPPRRGRSRSVERRRREEERQRLSSDRMRSRDMAGAHREDSPSISSRRRLNHS 433

  Fly   440 PLSVGELYKSPKQRQRSRSVSSKSS-------------------SQSSRSSRSRSRSR------- 478
            ||           |:||||...:||                   |:|....|.||:.|       
Zfish   434 PL-----------RRRSRSPRRRSSRSPLRHRERDRMDRRQPVRSRSQERRRRRSKEREDMFKGS 487

  Fly   479 ------------SQSSLED-EVDRQD---------------------VGADA---------SPSS 500
                        .:..||| :||.:|                     |..|:         ||.|
Zfish   488 LSEGMKAEQEDSDEEVLEDYDVDEEDEEALIEQRRLQRLAIMQKYKPVNEDSNMSGLSDHGSPQS 552

  Fly   501 STRSE--------ERGMTQEQPEEKP-----EEKLKEKQKSL-EEQIPCDDKGIPLPNYY----- 546
            ||.|.        ||.....:..|:.     |:.:|.|...: :|:...:.|..|.|:.:     
Zfish   553 STHSRSPSPDDILERVAADVKAYEQENLDTFEDNVKAKYSLVSQEKNGANSKKPPAPDMFTESDD 617

  Fly   547 -----------------------PGV-------QGCRSVEEFQCLNR-------IEEGTYGVVYR 574
                                   |.:       :|...|...:.|::       ..:|.:..|.|
Zfish   618 MFAAYFDSARLRAAGIGKDFKENPSLRDNWTDAEGYYRVNIGEVLDKRYAVYGYTGQGVFSNVIR 682

  Fly   575 AKD-KRTNEIVALKRLK----MEKEKEGFPITSLREINTLLK---------------------GQ 613
            |:| .|.|:.||:|.::    |:|       |.|:|:..|.|                     .|
Zfish   683 ARDLARANQEVAVKIIRNNEMMQK-------TGLKELEFLKKLNDADADDKFHCLRLFRHFYHKQ 740

  Fly   614 HPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPG----EVKCLTQQLLRAVA 674
            |                 :.:|.:.:..:|:.::     ||.....|    .|:..:|||..|:.
Zfish   741 H-----------------LCLVFEPLSMNLREVL-----RKYGKDVGLHIKAVRSYSQQLFLALK 783

  Fly   675 HLHDNWILHRDLKTSNLLLSH-KGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVY 738
            ||....|||.|:|..|:|::. |.|||:.|||.|.....  ...|..:|:.:|||||::: ...|
Zfish   784 HLKRCNILHADIKPDNILVNEPKTILKLCDFGSASHVAD--NDITPYLVSRFYRAPEIII-GKSY 845

  Fly   739 STPIDVWSVGCIFAEFLQMLPLFPGK--SEIDELNRIFKELGTPNEKIWPG-------------- 787
            ...||:|||||...|......|||||  :.:.:||...|. ..||:.|..|              
Zfish   846 DYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLNMDLKG-KLPNKMIRKGLFKDQHFDQNLNFL 909

  Fly   788 YTELPAVKNMLSQNSQFTEYPVSQLRKHF-------QEKTSEMG--LSLLQGLLTYDPKQRLSAD 843
            |||:..|..........|..|...|....       :::..::|  ..||..:|..||.:|::.:
Zfish   910 YTEVDKVTEREKITVMSTINPTKDLSMDMVGRQALPEDQRKKVGQLKDLLDQILMLDPAKRITIN 974

  Fly   844 AALKHGFFKE 853
            .||:|.|.:|
Zfish   975 QALQHPFIQE 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 93/361 (26%)
PLN00009 555..854 CDD:177649 94/361 (26%)
prpf4baXP_017207374.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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