DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and cdk9

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_997756.1 Gene:cdk9 / 321602 ZFINID:ZDB-GENE-030131-321 Length:393 Species:Danio rerio


Alignment Length:370 Identity:139/370 - (37%)
Similarity:196/370 - (52%) Gaps:41/370 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   542 LPNYYPGVQ--GCRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLR 604
            :..||.||:  .|....:::.|.:|.:||:|.|::||.::|.:.||||::.||.||||||||:||
Zfish    22 MSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALR 86

  Fly   605 EINTLLKGQHPNIVTVREI----VVGSNMDK--IFIVMDYVEHDLKSLMETMKNRKQSFFPGEVK 663
            ||..|...:|.|:|.:.||    ....|..|  |::|.|:.||||..|   :.|....|...|:|
Zfish    87 EIKILQLLKHENVVNLIEICRTKATQFNRYKGSIYLVFDFCEHDLAGL---LSNANVKFTLAEIK 148

  Fly   664 CLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREY----GSPIKKYTSLVVTL 724
            .:.|.||..:.::|.|.|||||:|.:|:|::..|:||:.||||||.:    .|...:||:.||||
Zfish   149 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTL 213

  Fly   725 WYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYT 789
            |||.|||||....|..|||:|..|||.||.....|:..|.:|..:|..|.:..|:...::|||..
Zfish   214 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVD 278

  Fly   790 ELPAVKNMLSQNSQFTEYPVSQLRKHFQEKTSEM----GLSLLQGLLTYDPKQRLSADAALKHGF 850
            :    |..|.|.   .|.|..|.||......:.:    .|.|:..||..||.||:.:|.||.|.|
Zfish   279 K----KYELYQK---MELPKGQKRKVKDRLKAYVKDPYALDLIDKLLVLDPAQRIDSDDALNHDF 336

  Fly   851 FKELPLPID---------PSMFPTWPAKSELGARKAQASSPKPPS 886
            |...|:|.|         .|||      ..|...:.:...|:.|:
Zfish   337 FWSDPMPSDLKNMLSTHNTSMF------EYLAPPRRRGHMPQQPA 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 124/312 (40%)
PLN00009 555..854 CDD:177649 125/312 (40%)
cdk9NP_997756.1 STKc_CDK9 27..337 CDD:270848 126/319 (39%)
S_TKc 40..337 CDD:214567 123/306 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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