DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and cdk-11.2

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_509746.2 Gene:cdk-11.2 / 181247 WormBaseID:WBGene00013917 Length:668 Species:Caenorhabditis elegans


Alignment Length:719 Identity:253/719 - (35%)
Similarity:360/719 - (50%) Gaps:150/719 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 VKDYETEENYEHRVERSDRREGGRKERERTVRSTHKQNRHDRVIELLDSPEQEHHHQHQHKSHRS 274
            :.:|.|..:.:.|:..||      .:...|..|...:|.|....|.....|:|..|:..|...| 
 Worm     1 MSNYSTNGSRKIRISNSD------DDSRETRFSIQPRNSHKTKEERYRDKEKERDHERHHDRER- 58

  Fly   275 KWREEVEVIRRKVPEDLELLARREKLLAAERESRQRKQTAREELEARRELLRERNEHSDALSPTT 339
              |::                |..|:.:.:...|.|:..|......|.|..|.||.|||      
 Worm    59 --RDD----------------RYRKVDSRDHRDRNRRSPAGSRTYCRDEPDRRRNNHSD------ 99

  Fly   340 VAASVTAGLNIHVKRKSKPDNYEKEIKLKKRREDDIEVIRDDDDEESEESDSNEEVPEQDSEGSA 404
                                        :.||           |..||.        ::|:..|.
 Worm   100 ----------------------------RNRR-----------DRSSER--------DRDNRSSK 117

  Fly   405 TESGSEDSYASKKKSKIKSKSQLEDDDEDLPLPDSPLSVGELYK---SPKQRQRSRSVSSKSSSQ 466
            :::.|.||..||...|.::.:.|.||             |:|:.   .|..:::.::|......:
 Worm   118 SKTKSPDSLRSKSSRKSQTPNHLPDD-------------GKLFDRILDPNYKKKEKTVMEVEDVE 169

  Fly   467 SSRSSRSRSRSRSQSSLED---------EVDRQDVGADASPSSSTRSEERGMTQE---------- 512
            .|..........|..:.:|         |.:.:|..::..|.|...:.:..:|.:          
 Worm   170 MSPVEMLDEEEVSTFTFDDACGPVRPSNEPEEKDYKSEGDPESRPATPKTPLTPDYLENTIVSLN 234

  Fly   513 ----QPEEK-PEEKL-----KEKQKSL---EEQIPCD-----------DKGIPLPNYYPGVQGCR 553
                ..|:| |::|.     ||:.:|:   |:::..|           :....||.||||::||:
 Worm   235 ETLSDDEDKGPDDKYGKTPDKEQWESMTENEQKLHRDAMKKRREQRHREAVSKLPVYYPGLRGCQ 299

  Fly   554 SVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTLLK-GQHPNI 617
            .:.|:..||.|.|||||.|:|.|:.||:|:|||||.||||||||||||:|||||.||| |.|.||
 Worm   300 HISEYVILNVIAEGTYGEVFRGKNTRTDEVVALKRFKMEKEKEGFPITALREINMLLKAGAHENI 364

  Fly   618 VTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWIL 682
            |.|:||:|||...::::.|:|||||:|||::.|::|.|.|..|:.|.|..|||..:.|:|..|||
 Worm   365 VNVKEILVGSTKTEVYMAMEYVEHDVKSLIDKMRSRNQRFKTGQQKTLMSQLLSGIEHMHKLWIL 429

  Fly   683 HRDLKTSNLLLSHKGILKVGDFGLAREYG-----SPIKKYTSLVVTLWYRAPELLLCSPVYSTPI 742
            ||||||||||:||.||||:.|||||||||     ....|.|.:|||||||:|||||....||||:
 Worm   430 HRDLKTSNLLISHSGILKIADFGLAREYGEARDIEKRMKLTPIVVTLWYRSPELLLEPKTYSTPV 494

  Fly   743 DVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEY 807
            |:||:|||.|||:.|.|:|.|.||.:::::||:.:|||.|:|||...|| .|.||:    :|...
 Worm   495 DMWSIGCIMAEFIMMKPMFQGDSEPNQVHQIFQMMGTPTEQIWPDIKEL-KVWNMV----EFPPV 554

  Fly   808 PVSQLRKHFQ-EK-TSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKELPLPIDPSMFPTWPAKS 870
            ...|||:.|: || .:|.|..||.|:|..:|..||:|..||:|.:|.|.|..:.|...|.:||||
 Worm   555 KPGQLRRIFKGEKLVNETGFDLLNGMLCLNPANRLTASEALQHDWFSEHPKAVPPEDLPVYPAKS 619

  Fly   871 ELGA 874
            ||.|
 Worm   620 ELNA 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 168/306 (55%)
PLN00009 555..854 CDD:177649 168/306 (55%)
cdk-11.2NP_509746.2 PKc_like 298..600 CDD:389743 168/306 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 383 1.000 Domainoid score I432
eggNOG 1 0.900 - - E1_KOG0663
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 474 1.000 Inparanoid score I822
Isobase 1 0.950 - 0 Normalized mean entropy S790
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 1 1.000 - - FOG0001516
OrthoInspector 1 1.000 - - otm14318
orthoMCL 1 0.900 - - OOG6_102464
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2585
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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