DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and cdk-7

DIOPT Version :10

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001370652.1 Gene:cdk-7 / 171784 WormBaseID:WBGene00000408 Length:330 Species:Caenorhabditis elegans


Alignment Length:312 Identity:121/312 - (38%)
Similarity:186/312 - (59%) Gaps:24/312 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 FQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKM---EKEKEGFPITSLREINTLLKGQHPNIVT 619
            :..:..:.||.:..||.|:|..:.|.||:|::|:   |:.|:|...|::|||..|.:..|.||:.
 Worm     5 YDTIKHLGEGQFANVYLAQDLESGECVAIKKIKLGSREEAKDGINRTAIREIKLLKEIHHDNIIG 69

  Fly   620 VREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHR 684
            :|:::  .:...|.:|.|:::.||:   ..:|:::....|..:|.:|.|:|..:..||.:|||||
 Worm    70 LRDVI--GHRTSIQLVFDFMDTDLE---HVIKDKEIILMPAHIKNITMQMLLGLEFLHVHWILHR 129

  Fly   685 DLKTSNLLLSHKGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGC 749
            |||.:|||::..|.:|:.||||||.:|||.:.||..|||.||||||||..:..|...||:|||||
 Worm   130 DLKPNNLLMNKMGRVKLTDFGLARFFGSPNRNYTHQVVTRWYRAPELLFGARSYGVGIDIWSVGC 194

  Fly   750 IFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRK 814
            |.||.|...|:|||:|:||:|.:||..||.|..:.||..||:.:...:..|    |||  ..|..
 Worm   195 IIAELLLRNPIFPGESDIDQLVKIFNILGCPTPETWPNMTEMNSYVIIKPQ----TEY--MALNY 253

  Fly   815 HFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFK---------ELPLP 857
            :|.....:: |.|:.|:.|:||.:||:...:|:..:|:         |||||
 Worm   254 YFSAAPQDL-LDLMAGMWTFDPIKRLTCTQSLQMEYFRTQPFCCLDEELPLP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 115/295 (39%)
cdk-7NP_001370652.1 STKc_CDK7 4..302 CDD:270833 117/308 (38%)

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