DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitslre and cdk13

DIOPT Version :9

Sequence 1:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_002940845.2 Gene:cdk13 / 100489599 XenbaseID:XB-GENE-6040279 Length:1391 Species:Xenopus tropicalis


Alignment Length:1042 Identity:264/1042 - (25%)
Similarity:411/1042 - (39%) Gaps:230/1042 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ASRESGSGP------RREKKKHSRERRRHKER---------------DDVGGAALALERDHRYDY 86
            ||..||..|      |:.:..|.|::||.:::               ||...|.           
 Frog    20 ASSVSGQHPGPADDSRKRRSHHQRKKRRARQQAMLDCSVEPVGPTDGDDSQAAT----------- 73

  Fly    87 RSREEHYHHHQRE---------------RSSNAAAAYAKH---------HLGHAYHYPQPP---- 123
            |.|..|..|.:|:               |...|.|...::         .|......|.||    
 Frog    74 RGRRHHRMHRERKKRRKDRGGSGRRSGLRKDRARAPTVEYDDVSSLSDGDLSEGEQVPTPPFAPS 138

  Fly   124 ------------QQQQQPL---PPAPSYAAHHYHHHQHLSGARAAPREYHSYPSGYH-------- 165
                        .:...|:   ||.|..:..........||.|...|.    |...|        
 Frog   139 VLGLGLNASPASDRCPSPVGLPPPPPQVSLLRQRGDSGRSGRRKTSRR----PESKHRRREDMQD 199

  Fly   166 --SGSRHGDYPMEEPTRRSSKYAESKDAESLEQDLRSRLLKKRHNYVKDYETE--ENYEHRVERS 226
              .|...||..:..|...:|.:....:.....:.....|.:.:......|..:  :.|..:..||
 Frog   200 RRRGGEIGDLLLPTPLMLASTWRPQCELGKKPEFRPVPLFRPKREEALAYNKQPPKAYRDKGFRS 264

  Fly   227 DRREGG-RKERERTVRST------HKQNRHDRVIELLDSPEQEHHHQHQHKSHRSKWREEVEVIR 284
            ...:|. ||:....|||.      |:|||......:.|..|.....:.:.:|..|.........|
 Frog   265 SVLQGNHRKKSLSPVRSPSPGYSGHRQNRRSPSFGVRDKNETSPPARRRSRSPYSPGGRRTARSR 329

  Fly   285 RKVPEDLELLARREKLLAAERESRQRKQTAREELEARRELLRERNEHSDALSPTTVAASVTAG-L 348
            .:.|........|.:...::..||| ...:..:|..:..|..|.|::..|.......|...|| :
 Frog   330 SRSPYKPRHSRSRSRHRGSKSRSRQ-SSISPSKLTLKSSLAAELNKNKKAREAEAARAQAKAGKI 393

  Fly   349 NIHVK------RKSKPDNYEKEIKLKKRREDDIEVIRDDDDE-----ESEESDSNEEVPEQDSEG 402
            :..||      ..|:..|..||  .||.:.|.::......::     :|:||.....:|.:.:..
 Frog   394 STPVKGQLEAVSNSQQSNTAKE--QKKVKTDRVQSPSQKSEKAKVKVQSQESCRENNLPAEKTAK 456

  Fly   403 SATESG-----SEDSYASKKKS-----------KIKSKSQLEDDDEDLPLPDSPLSVGELYKSPK 451
            |:::..     .:::..||:|:           |||..:.|......||||....|.||.::.  
 Frog   457 SSSKVSKIDLVKQETCTSKEKAKTHNSDAATTEKIKCLALLTSALPSLPLPPVLSSHGESFRG-- 519

  Fly   452 QRQRSRSVSSKSSSQSSRSSRSRSRSRSQSSLEDEVDRQ------DVGADASPSSSTRSEERGMT 510
                  .|..|                   |::.|::|:      |:.....|:..:.||:   .
 Frog   520 ------CVPGK-------------------SVKKEMERKLRTLLSDLPLPPLPAPQSESED---V 556

  Fly   511 QEQPEEKPEEKLKEKQ---------KSLEEQIPCDDKGIPLPNYYPGVQGCRSVEEFQCLNRIEE 566
            .:.||.|..:...:::         :.||::|.               .|.|.|::|..:..|.|
 Frog   557 SDSPERKKNQSRNKRRPKICGPRCGEILEKEID---------------WGKRCVDKFDIIGIIGE 606

  Fly   567 GTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTLLKGQHPNIVTVREIVVGS---- 627
            ||||.||:||||.|.|:||||:::::.||||||||::|||..|.:..|.:|:.::|||...    
 Frog   607 GTYGQVYKAKDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLNHQSIINMKEIVTDKEDAL 671

  Fly   628 --NMDK--IFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKT 688
              ..||  .::|.:|::|||..|:|   :....|....:|...:||:..:.:.|....||||:|.
 Frog   672 DFKKDKGAFYLVFEYMDHDLMGLLE---SGLVHFNEHHIKSFMRQLMEGLDYCHKRNFLHRDIKC 733

  Fly   689 SNLLLSHKGILKVGDFGLAREYGS-PIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFA 752
            ||:||:::|.:|:.||||||.|.| ..:.||:.|:|||||.|||||....||..|||||.|||..
 Frog   734 SNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYSPAIDVWSCGCILG 798

  Fly   753 EFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQ 817
            |.....|:|....|:.:|..|.:..|:|...:||...:||....|         .|..|.|:..:
 Frog   799 ELFTKKPIFQANQELAQLELISRMCGSPCPAVWPDVIKLPYFNTM---------KPKKQYRRKLR 854

  Fly   818 EK---TSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKEL-PLPIDPSMFPTWPAKSELGARKAQ 878
            |:   .....|.|...:|..||.:|.:|:.||...|.::: |..:.|...|.|....||.::|.:
 Frog   855 EEFVFIPNAALDLFDHMLALDPNKRCTAEQALLCEFLRDVDPSKMTPPDLPLWQDCHELWSKKRR 919

  Fly   879 ASS----------PKPPSGGSQFKQLGRDEPIIVGP-GNKLSSGIITGNKKSHGAGGSSASTGFV 932
            ...          ||.|...|   .||.|:.....| |.::||.:.|....|.|.|  :.|:|..
 Frog   920 RQKQLGMGDDLTVPKVPRKDS---SLGMDDSRNSTPQGMQISSQLKTQGFPSVGVG--NPSSGQQ 979

  Fly   933 LN 934
            ||
 Frog   980 LN 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 120/310 (39%)
PLN00009 555..854 CDD:177649 120/310 (39%)
cdk13XP_002940845.2 STKc_CDK12 590..891 CDD:270847 121/312 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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