DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4042 and dmac2l

DIOPT Version :10

Sequence 1:NP_649250.2 Gene:CG4042 / 40291 FlyBaseID:FBgn0037018 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001017243.1 Gene:dmac2l / 549997 XenbaseID:XB-GENE-978777 Length:199 Species:Xenopus tropicalis


Alignment Length:200 Identity:47/200 - (23%)
Similarity:90/200 - (45%) Gaps:26/200 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KPIDLSPRNIRQ------W-WENRE-ERIERHMQQFVPERHKILGAELAAAHFILYRGGAVKFIN 146
            :|..:|.:.||.      | |.|.. .:::.       ||.|..|.:.||:.::|..|..|::..
 Frog     8 RPTFISKKQIRPGACRYFWGWLNAVFNKVDY-------ERIKDFGPDRAASEWLLRCGAHVRYKG 65

  Fly   147 DTHWRRASKDGEFKLPNKFDPRYKVEALRCDNMELYYEGLENLRCLDSLKFLSFHNVKSFDDWCL 211
            ...|:: ..:|   ||.....::|::|:...:..:.|.|.::|..|:.::.:........:|.||
 Frog    66 FERWQQ-DYNG---LPTGPLGKFKIQAINATDSCIMYRGFDHLDGLEHVEEIKLCKCIYIEDTCL 126

  Fly   212 DRIS-----GGGFPNLEVLDLSCTQITSNGLACLYRFPKLKLLILNDPKETLELELSTVMLEEAM 271
            :|:|     ......||:  :||..:|..|:..|.....|:.|.|:|.....:.:.:..||:.|.
 Frog   127 ERMSKIENLQNSLRRLEI--ISCGNVTDRGIIALNTLRNLEYLFLSDLPGITKKQTTVEMLQTAN 189

  Fly   272 PALKI 276
            |:|.:
 Frog   190 PSLHV 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4042NP_649250.2 leucine-rich repeat 192..221 CDD:275381 6/33 (18%)
leucine-rich repeat 222..245 CDD:275381 7/22 (32%)
dmac2lNP_001017243.1 leucine-rich repeat 110..137 CDD:275381 5/26 (19%)
LRR_CC 138..158 CDD:197685 6/21 (29%)
leucine-rich repeat 139..163 CDD:275381 7/25 (28%)

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