DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4042 and dmac2

DIOPT Version :9

Sequence 1:NP_001262121.1 Gene:CG4042 / 40291 FlyBaseID:FBgn0037018 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_004917157.1 Gene:dmac2 / 100485450 XenbaseID:XB-GENE-6045848 Length:396 Species:Xenopus tropicalis


Alignment Length:205 Identity:44/205 - (21%)
Similarity:65/205 - (31%) Gaps:73/205 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LKLFSNAEQTSDFIVMMQKPIDLSPRNIRQ-------WWENREERI--ERHMQQFV----PERHK 123
            |:.|...|..|     |....|:: .|:|:       :|.|:|:.:  .:.|:.:.    .|..|
 Frog    51 LEPFKGQEDVS-----MNTLHDMA-NNLRRLLISSNSYWNNKEQNLLDSKDMRAWTCKTSKEPLK 109

  Fly   124 ILGAELAAAHFILYRGGAVKF-----------INDTHWRRASKDGEFKLPNKFDPRYKVEAL--- 174
            .|..........|..||..::           .|.|....|.|..    |..|..|..|.:.   
 Frog   110 DLKTYPEPLQLFLQHGGCREYRLIIDQPDKCPYNRTFLLLAIKSS----PQNFAQRQAVRSSWGT 170

  Fly   175 -RCDNMELYYEGL----------------------ENLRCLDSLK--FL-SFHNV----KSFDDW 209
             ||      |.||                      ||.:..|.|:  || :|.|:    :.|..|
 Frog   171 ERC------YGGLYVRLVFLLGVAPGQDFSPLIWYENGQSHDLLQWDFLDTFFNLTLKDQLFLGW 229

  Fly   210 CLDRISGGGF 219
            ...|.||..:
 Frog   230 ARLRCSGAKY 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4042NP_001262121.1 leucine-rich repeat 192..221 CDD:275381 11/35 (31%)
leucine-rich repeat 222..245 CDD:275381
dmac2XP_004917157.1 Galactosyl_T 159..347 CDD:389837 20/87 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1458966at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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