DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and Vit

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_083089.1 Gene:Vit / 74199 MGIID:1921449 Length:650 Species:Mus musculus


Alignment Length:242 Identity:44/242 - (18%)
Similarity:73/242 - (30%) Gaps:80/242 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 VVVVELVPENNQTPGECCGTYECQAEPNCTV----VRDTDFHWLKQCRRCKCESGLK-------- 178
            |::|..:..|.:||.:.........:.||.|    :.:.:|       ..||.:|.:        
Mouse    18 VLLVTGIHSNKETPKKTKRPKLTVPQINCDVKAGKIINPEF-------MVKCPAGCQDPKYHVYG 75

  Fly   179 ---------IC----HK-TCDERAEGVCQSKISGM-----FYKDG------ENWTENCKTCECEK 218
                     :|    |. ..|.....:...|::|.     .|.:|      ..|.|:....|   
Mouse    76 TGVYASYSSVCGAAIHSGVLDNSGGKILVRKVAGQSGYKGSYSNGVQSLSLPRWRESFIVAE--- 137

  Fly   219 GEPKCTMSFCGNLNCPSEQQVMLKDTCCPVCWPKCAPMPHEKQDDGSYEDYVDESETPEEDSLPP 283
            .:|:..:::...|...|.:....|                             ..||.:....|.
Mouse   138 SKPQKGVAYPSTLTYSSSKTAAAK-----------------------------AGETTKAYEKPS 173

  Fly   284 LLPDPLTTQQSAELVATSTTTSSNGTTSTTVVPLAATVNCNNAFDQP 330
            :   |.||.|...|.....|..:..|..:|..|.||:|. |:...||
Mouse   174 I---PGTTIQPVTLTQAQATPVAEVTHRSTSKPFAASVT-NSPRPQP 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 10/62 (16%)
VitNP_083089.1 LCCL 44..133 CDD:281766 16/95 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..226 8/20 (40%)
vWFA 265..428 CDD:294047
vWA_collagen 466..626 CDD:238749
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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