DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and VIT

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_444506.2 Gene:VIT / 5212 HGNCID:12697 Length:693 Species:Homo sapiens


Alignment Length:59 Identity:20/59 - (33%)
Similarity:24/59 - (40%) Gaps:14/59 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 ETPEEDSLPPLLPDPLTTQQSAEL---------VATSTT--TSSNGTTSTTVVPLAATV 321
            ||.:....||:   |.||.|...|         |||.||  ..|....|||.:|...:|
Human   164 ETTKAYQRPPI---PGTTAQPVTLMQLLAVTVAVATPTTLPRPSPSAASTTSIPRPQSV 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663
VITNP_444506.2 LCCL 44..133 CDD:281766
vWFA 308..471 CDD:294047
vWA_collagen 509..669 CDD:238749
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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