DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and NEFM

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_005373.2 Gene:NEFM / 4741 HGNCID:7734 Length:916 Species:Homo sapiens


Alignment Length:115 Identity:26/115 - (22%)
Similarity:44/115 - (38%) Gaps:32/115 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 LKICHKTCDERAEGVCQSKISGMFYKDGENWT------------ENCKTCECEKGEPKCTMSFCG 229
            ||:.||..:|..|   ::|:.....:..|..|            |..:..|.::.||:.      
Human   446 LKVQHKFVEEIIE---ETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEA------ 501

  Fly   230 NLNCPSEQQVMLKDTCCPVCWPKCAPMPHEKQDDGSYEDYVDESETPEED 279
                 .|::|..|.:      |..|..|..|:::|..|:...:.|..|||
Human   502 -----EEEEVAAKKS------PVKATAPEVKEEEGEKEEEEGQEEEEEED 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 9/63 (14%)
NEFMNP_005373.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Head 2..104
Filament_head 10..78 CDD:282575
Filament 100..411 CDD:278467
Coil 1A 105..136
Linker 1 137..149
Coil 1B 150..248
Linker 12 249..265
Coil 2A 266..287
Linker 2 288..291
Coil 2B 292..412
Tail 413..916 26/115 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 485..851 17/73 (23%)
6 X 13 AA approximate tandem repeats of K-S-P-V-[PS]-K-S-P-V-E-E-[KA]-[GAK] 614..691
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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