DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and Otog

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001099732.1 Gene:Otog / 292918 RGDID:1306610 Length:2902 Species:Rattus norvegicus


Alignment Length:407 Identity:93/407 - (22%)
Similarity:132/407 - (32%) Gaps:162/407 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EPLPDLCQ-SVKCPPDAEMQCP--------ADSSI---RHNLLAVDLIK---SNAVELPNASEMA 81
            || |:.|| .|..|.|.| ||.        ::.:|   ||:.|.:...|   :::..:|.|.   
  Rat  2364 EP-PETCQDGVLGPLDPE-QCQVLGEGCVCSEGTILHRRHSALCIPEDKCACTDSTGVPRAL--- 2423

  Fly    82 SAADGVSYNRGLISDEDYVQCCLNRKCVCK---TCYIPDCPSDADE------DVVVVELVPEN-- 135
                |.::|..|..      || .::|...   |...||||....|      :|::::...:.  
  Rat  2424 ----GETWNSSLSG------CC-QQQCQAPDTITPMDPDCPGPRPESCPRFGEVILLQPTEDPCC 2477

  Fly   136 -------NQT----------PG----------ECCGTYECQAEPN-CTVVRDTDFHWLKQCRR-- 170
                   |||          ||          .||.:|.|:.:|. |      :...:..||:  
  Rat  2478 LGSVCVCNQTLCEGLAPTCRPGHRLIPHFQEDSCCPSYSCECDPGLC------EAEQVPTCRQDQ 2536

  Fly   171 ----------CKCESGLKICHKTCDERAEGVCQSKISGMFYKDGE------NWTENC---KTCEC 216
                      | |.|....|.:..|...|  ||         :||      |.||.|   ..|.|
  Rat  2537 VLIEGRLGDSC-CPSYFCGCGECPDAMPE--CQ---------EGEVLTVHRNSTELCCPLYQCVC 2589

  Fly   217 EKGEPKCTMSF-CGNLNC---PSEQQVMLKDTCCPV--CWPKCAPMP----HEKQDDGSYEDYVD 271
            |        || |..:.|   .|..:|...|.|||.  |...|..:|    |..:.....|:::.
  Rat  2590 E--------SFRCPQIQCGMGTSLVEVWSPDRCCPYKSCECDCDTIPVPRCHLWEKSQLDEEFMH 2646

  Fly   272 ESETP------EEDSLPPLLPDPLTTQQSAELVATSTTTSSNGTTSTTVVPLAA-----TVNCNN 325
            ..|..      |....|..|...|...|..:                |||.|:|     |..|.:
  Rat  2647 SVENVCGCAKYECVKAPVCLSRELGVMQPGQ----------------TVVELSADGVCHTSRCTD 2695

  Fly   326 AFDQPKVVEVVNQTNYY 342
            ..|.        .||:|
  Rat  2696 VLDP--------LTNFY 2704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 19/66 (29%)
OtogNP_001099732.1 VWD 143..293 CDD:278521
C8 339..403 CDD:285899
TIL 417..465 CDD:280072
VWC 467..>502 CDD:302663
VWD 505..660 CDD:278521
C8 700..761 CDD:285899
TIL 771..835 CDD:280072
TIL 875..937 CDD:280072
VWD 968..1122 CDD:214566
C8 1157..1231 CDD:214843
Fascin <1296..1387 CDD:304938
VWD 2089..2243 CDD:278521
C8 2279..2347 CDD:214843
TIL 2350..2411 CDD:280072 15/48 (31%)
CT 2819..2901 CDD:214482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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