DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and Fras1

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_038947596.1 Gene:Fras1 / 289486 RGDID:1306516 Length:4014 Species:Rattus norvegicus


Alignment Length:400 Identity:83/400 - (20%)
Similarity:125/400 - (31%) Gaps:142/400 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RCLHQMLIIYVLIFVSSATTLDQEPLPDLCQSVKCPPDAEMQCPADSSIRHNLLAVDLIKSNAVE 73
            ||.||.                       |..:.|.|. |::.              |.:.:...
  Rat   123 RCSHQQ-----------------------CTPLSCGPQ-ELEF--------------LAEGHCCP 149

  Fly    74 LPNASEMASAADGVSYNRGLISDEDY-VQCCLNRKCVCKT----CYIPDC-PSDADEDVVVVELV 132
            :...:....:.||..:..|    ||: :..|  .||||:.    |:...| |...::|.:||   
  Rat   150 ICVGTGKPCSDDGHVFQDG----EDWPLSHC--AKCVCRNGLTQCFTAQCQPLFCNQDEIVV--- 205

  Fly   133 PENNQTPGECCGTYECQAEPNCTVVRDTDFH---WLKQ-CRRCKCESGLKICHK----------- 182
                :.||:||.  :|.:. :|:.......|   |.:. |..|.|:.|...|||           
  Rat   206 ----RVPGKCCS--QCSSR-SCSTAGQVYEHGEQWKEDACTLCMCDQGQVRCHKQACPPLRCAKG 263

  Fly   183 ---------TCDERAEGVCQSKISGMFYKDGENWTEN-CKTCECEKGEPKCTMSFCGNLNC-PSE 236
                     .|:|....|......|:.....|.|..: |:.|.|::|:..|....|..:.| |.|
  Rat   264 QSKARHHGQCCEECVSPVRSCSSGGVLRYQDEMWKGSACEFCVCDQGQVTCQTGECAKVACAPGE 328

  Fly   237 QQVMLKDTCCPVCWPKCAPMPHEKQDDGSYEDYVDESETPE----------------------ED 279
            :.|.|:..|||.|..:.....:|::.:....:..:....||                      |.
  Rat   329 ELVHLEGKCCPECISRNDYCVYEEKAEIMSSNSSEIKHVPEGKKWEEGPCKLCECREAQVTCYEP 393

  Fly   280 SLPP----------------------LLPDPLTTQQSAE---LVATSTTTSSNGTTSTTVVPLAA 319
            |.||                      ..||.||...|.|   |....|....||    ..||   
  Rat   394 SCPPCPVATLAMAVKGQCCPDCTPVHCHPDCLTCSHSPEHCDLCQDPTKLLQNG----RCVP--- 451

  Fly   320 TVNCNNAFDQ 329
              :|...|.|
  Rat   452 --SCGLGFYQ 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 17/53 (32%)
Fras1XP_038947596.1 VWC 27..86 CDD:214564
VWC 94..151 CDD:278520 9/65 (14%)
VWC 158..>198 CDD:327433 13/45 (29%)
VWC 224..277 CDD:278520 10/52 (19%)
VWC 284..341 CDD:214564 17/56 (30%)
VWC 368..415 CDD:327433 6/46 (13%)
VSP 405..780 CDD:146106 14/63 (22%)
VSP 728..1059 CDD:146106
FU 1045..1086 CDD:214589
Cadherin_3 1101..1197 CDD:406568
Cadherin_3 1202..1309 CDD:406568
Cadherin_3 1313..1440 CDD:406568
Cadherin_3 1448..1576 CDD:406568
Cadherin_3 1579..1693 CDD:406568
Cadherin_3 1703..1813 CDD:406568
Cadherin_3 1822..1940 CDD:406568
Cadherin_3 1943..2061 CDD:406568
Cadherin_3 2081..2181 CDD:406568
Cadherin_3 2188..2295 CDD:406568
Cadherin_3 2297..2408 CDD:406568
Cadherin_3 2427..2539 CDD:406568
Calx-beta 2555..2652 CDD:413355
Calx-beta 2677..2763 CDD:413355
caca <2782..>3049 CDD:273296
Calx-beta 3041..3135 CDD:413355
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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