DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13252 and VWCE

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_689931.2 Gene:VWCE / 220001 HGNCID:26487 Length:955 Species:Homo sapiens


Alignment Length:379 Identity:84/379 - (22%)
Similarity:123/379 - (32%) Gaps:112/379 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TTLDQEPLPDLCQSVKCPP----DAEMQCPA-DSSIRHNLLAVDLIKSNAVELPNA---SEMASA 83
            ||....|.|.|..|....|    ...:..|. .:|:..||....|::...:..|::   .|....
Human   315 TTRLPSPTPRLPTSSPSAPVWLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSPRGPESPRL 379

  Fly    84 ADGVS---------YNRGLISDEDYVQC-CLNRKCVCK------TCYIPDCPSDADEDVVVVELV 132
            |.|.|         .:|...::....|| |.:.|..|:      .|..|               :
Human   380 AAGPSPCWHLGAMHESRSRWTEPGCSQCWCEDGKVTCEKVRCEAACSHP---------------I 429

  Fly   133 PENNQTPGECCGTYECQAEPNCT------VVR---DTDFHWLKQCRRCKCESGLKICHKTCDERA 188
            |..:   |.||        |:||      |||   |......:.|..|.|.:|...|  ...|..
Human   430 PSRD---GGCC--------PSCTGCFHSGVVRAEGDVFSPPNENCTVCVCLAGNVSC--ISPECP 481

  Fly   189 EGVCQSK--------------ISGMFYKDGENWT---ENCKTCECEKGEPKCTMSFCGNLNCPSE 236
            .|.||:.              ..|.:|.||..::   :.|.||.|:.||.:|:...|..|.||.|
Human   482 SGPCQTPPQTDCCTCVPVRCYFHGRWYADGAVFSGGGDECTTCVCQNGEVECSFMPCPELACPRE 546

  Fly   237 QQVMLKDTCCPVCWPKCAPMPHE--KQDDGSYEDYVDESETPEE--------------------- 278
            :..:....||..|.   .|.|..  ..||...|..:.:..:|.:                     
Human   547 EWRLGPGQCCFTCQ---EPTPSTGCSLDDNGVEFPIGQIWSPGDPCELCICQADGSVSCKRTDCV 608

  Fly   279 DSLP-PL-LPDPLTTQQSAELVATSTTTSSNGTTSTTVVP------LAATVNCN 324
            ||.| |: :|.......||....|.....:|.|..:.:.|      |..:|.|:
Human   609 DSCPHPIRIPGQCCPDCSAGCTYTGRIFYNNETFPSVLDPCLSCICLLGSVACS 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 18/54 (33%)
VWCENP_689931.2 EGF_CA 142..180 CDD:214542
cEGF 200..223 CDD:315355
EGF_CA 220..262 CDD:214542
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..329 5/13 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..380 2/19 (11%)
VWC 386..440 CDD:327433 13/79 (16%)
VWC 501..559 CDD:327433 18/57 (32%)
VWC 572..625 CDD:214564 8/52 (15%)
VWC 629..684 CDD:327433 7/34 (21%)
VWC 687..742 CDD:327433
Atrophin-1 <726..944 CDD:331285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 812..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 903..955
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.