DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and R11G1.1

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001361923.1 Gene:R11G1.1 / 187815 WormBaseID:WBGene00020010 Length:1745 Species:Caenorhabditis elegans


Alignment Length:365 Identity:77/365 - (21%)
Similarity:107/365 - (29%) Gaps:102/365 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VSSATTLDQEPLPDLC--------QSVKCP-PDAEMQCPADSSIRHNL-LAVDLIKSNAV----- 72
            |.:.|....:|..|.|        .||.|. |:.:.:...:......| |.|..:|.|.|     
 Worm   663 VPTTTVKTGDPQVDDCLRRMSDSGGSVICDCPNGQFKNTGNGQCEETLSLVVVKVKVNTVCNTDK 727

  Fly    73 -ELPNASEMASAADGVSYNRGLISDED------YVQCCLNRKCVCKTCYIPDCPSDADEDVVVVE 130
             .|.....:.....|.||...:.|.|.      .|||             .||.....:.::...
 Worm   728 ASLEQKQRILHQKIGQSYKSCIRSAEHDSALVAIVQC-------------SDCTLQEIDRLLTTR 779

  Fly   131 LV--PENNQTPGECCGTYEC-QAEPN-CTVVRD--TDFHWLKQCRRCKCESGLKICHKTCDERAE 189
            ..  |.|.....|..||..| .:|.| |.|..|  .|...|:..  |||:.|      |.|.   
 Worm   780 SFGEPGNLNLTAEALGTDLCSNSEFNHCHVYSDCILDDENLRYA--CKCKKG------TTDS--- 833

  Fly   190 GVCQSKISGMFYKDGENWTENCKTCECEKGEPKCTMSF--C---------GNLNCPSEQQVMLKD 243
                        .||..     ::||....|..|.|.|  |         |:.        .|..
 Worm   834 ------------SDGYG-----RSCEGFPEESDCVMVFGICLIVWLIFLLGSF--------FLSL 873

  Fly   244 TCCPVCWPKCAP------MPHEKQDDGSYEDYVDE--SETPEEDSLPPLLPDPLTTQQSAELVAT 300
            ..|..|:..|..      ..|....||.....|.:  :::.|.|.....||      ....:.|.
 Worm   874 LACIACYALCRKRCCRYIAIHPANADGLQTVVVGQKAAKSLEMDGNREKLP------HMKAIFAE 932

  Fly   301 STTTSSNGTTSTTVVPLAATVNCNNAFDQPKVVEVVNQTN 340
            |...|:.|:||.......|..........|.:.:|:.:.|
 Worm   933 SLKHSAKGSTSVASAFALADFKRKKVSRPPDMSQVIEEVN 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 12/62 (19%)
R11G1.1NP_001361923.1 LDLa 32..64 CDD:197566
LDLa 113..145 CDD:238060
PHA03247 <268..594 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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