DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13252 and Vwf

DIOPT Version :10

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_446341.1 Gene:Vwf / 116669 RGDID:621759 Length:2812 Species:Rattus norvegicus


Alignment Length:316 Identity:68/316 - (21%)
Similarity:98/316 - (31%) Gaps:82/316 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CQSVKCPPDAEMQCPADSSIRHNLLAVDLIKSNAVELPNASEMASAADGVSYNRGLISDEDYVQC 102
            |:..:....|::.||....:      .||:..|   ||..............|.|        :|
  Rat  2307 CEVARLKQSADLCCPEYECV------CDLVNCN---LPPVPPCEGGLQPTLTNPG--------EC 2354

  Fly   103 -----CLNRKCVCKTCYIPDCPSDADEDVVVVELVPENNQTP----GECCGTYECQAEPNCTVVR 158
                 |..||..||....|.||.               ::||    .:||..|||    .|:.|.
  Rat  2355 RPTFTCACRKEECKRVSPPSCPP---------------HRTPTLRKTQCCDEYEC----TCSCVN 2400

  Fly   159 DT---DFHWLKQC--RRCKCESGLKICHKTCDERAEGVCQSKISGMFYKDGENWTENCKTCECEK 218
            .|   ...:|...  ..|.|.:...:..|.|..|          |..|..|:.|.|.|.||.|..
  Rat  2401 STLSCPLGYLASATTNDCGCTTTTCLPDKVCVHR----------GTVYPVGQFWEEGCDTCTCTD 2455

  Fly   219 GE--------PKCTMSFCGNLNCPSEQQVMLKDTCCPVCWPKCAPMPHEKQDD--GSYEDYVDES 273
            .|        .:|:...|.:...|....|:.:..||..|.|....:....:.|  .|::....:.
  Rat  2456 MEDTVVGLRVAQCSQKPCEDSCQPGFSYVLHEGECCGKCLPSACKVAGSPRGDSLSSWKSVGSQW 2520

  Fly   274 ETPEEDSLPPLLPDPLTTQQSAELVATSTTTSSNGTTSTTVVPLAAT---VNCNNA 326
            ..||.    |.|.:.....:.|..|     ...|.:.....||...|   :||..:
  Rat  2521 AVPEN----PCLINECVRVEDAVFV-----QQRNISCPQLAVPTCPTGFQLNCETS 2567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:450195 16/59 (27%)
VwfNP_446341.1 VWD 35..179 CDD:459671
C8 218..292 CDD:214843
TIL 295..348 CDD:410995
VWD 388..541 CDD:459671
C8 579..649 CDD:214843
TIL 652..707 CDD:410995
TIL <788..827 CDD:410995
VWD 856..1011 CDD:214566
C8 1053..1127 CDD:214843
TIL 1146..1196 CDD:410995
VWA_N2 1198..1276 CDD:465038
VWA 1277..1449 CDD:214621
VWA 1498..1658 CDD:459670
VWA 1691..1862 CDD:459670
VWD 1950..2102 CDD:459671
C8 2138..2199 CDD:462584
TIL 2203..2254 CDD:410995
VWC 2257..2321 CDD:214564 2/13 (15%)
VWC 2431..2494 CDD:214564 18/72 (25%)
VWC 2581..2643 CDD:450195
CT 2726..2807 CDD:214482
Blue background indicates that the domain is not in the aligned region.

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