DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13252 and Fcgbp

DIOPT Version :9

Sequence 1:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001158129.3 Gene:Fcgbp / 100303643 RGDID:2313189 Length:2583 Species:Rattus norvegicus


Alignment Length:315 Identity:71/315 - (22%)
Similarity:103/315 - (32%) Gaps:103/315 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YVLIFVSSATTLDQEPLPDLCQSVKCPPDAEMQCPADSSIRHNLLAVDLIKSNAVELPNASEMAS 82
            ||....::...|.:...||.|         .:||||:|   |..|..|   |..|..|:    .|
  Rat  1893 YVAACQAAGAQLGEWRKPDFC---------PLQCPANS---HYQLCGD---SCPVSCPS----LS 1938

  Fly    83 AADGVSYNRGLISDEDYVQCCLNRKCVCKTCYIPDCPSDADEDVVVVELVPENNQTPGEC-C--- 143
            |.:|             .:......|||.:.::    ...|..|.|           |:| |   
  Rat  1939 APEG-------------CETTCREGCVCDSGFV----LSGDTCVPV-----------GQCGCLYN 1975

  Fly   144 GTYECQAEPNCTVVRDTDFHWLKQCRR-CKCESGLKICHKTCDERAEGVCQSKISGMFYKDGENW 207
            |.|         .|....|:...:|.| |:|..|.::   ||.|.|:  |:.      |::    
  Rat  1976 GRY---------YVLGATFYPGPECERLCECGPGGQV---TCQEGAD--CEP------YEE---- 2016

  Fly   208 TENCKTCECEKGEPKCTMSFCGNLNCPSEQQVM----------LKDTCCPVCWPKCAPMPHEKQD 262
                  |..|.|...|..:.||  :|.:...|.          |..:|..|....|.|.|.|::.
  Rat  2017 ------CRVENGVQACHPTGCG--HCLANGGVHYVTLDGRVYDLHGSCSYVLAGVCRPKPGEEEF 2073

  Fly   263 DGSYEDYVDESETPEE------DSLPPLLPDPLTTQQSAELVATSTTTSSNGTTS 311
            ....|.  |.:..|:.      |.:..|...|..| ...|.||....|:....|:
  Rat  2074 SIVLEK--DSAGEPQRVVVTVADQVVVLARGPQVT-VDGEAVALPVATAHVSVTA 2125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13252NP_649248.3 VWC 197..249 CDD:302663 11/61 (18%)
FcgbpNP_001158129.3 VWD 56..210 CDD:395046
C8 251..326 CDD:214843
TIL 329..383 CDD:396409
VWD 448..603 CDD:395046
C8 642..717 CDD:214843
TIL 720..773 CDD:396409
VWC 775..829 CDD:327433
VWD 836..991 CDD:395046
C8 1034..1109 CDD:214843
TIL 1112..1165 CDD:396409
VWC 1167..1219 CDD:327433
VWD 1253..1412 CDD:395046
C8 1451..1526 CDD:214843
TIL 1530..1584 CDD:410995
VWD 1652..1808 CDD:395046
C8 1840..1914 CDD:214843 6/29 (21%)
TIL 1917..1970 CDD:396409 20/90 (22%)
VWD 2024..2180 CDD:214566 24/107 (22%)
C8 2222..2296 CDD:214843
TIL 2299..2352 CDD:396409
VWC 2357..2407 CDD:327433
VWD 2406..2560 CDD:413350
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.